RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 KCTD12Q96CX2 325 aaKnown RBP11.72□□□□□ -0.53
UPK1A-202ENST00000379013 TIMD4Q96H15 378 aa11.72□□□□□ -0.53
UPK1A-202ENST00000379013 PPIL3Q9H2H8 161 aaKnown RBP11.72□□□□□ -0.53
UPK1A-202ENST00000379013 SMURF1Q9HCE7 757 aa11.72□□□□□ -0.53
UPK1A-202ENST00000379013 GCM1Q9NP62 436 aa11.72□□□□□ -0.53
UPK1A-202ENST00000379013 AK6Q9Y3D8 172 aaKnown RBP11.72□□□□□ -0.53
UPK1A-202ENST00000379013 LOC100289279A0A1B0GTE1 492 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 IFITM5A6NNB3 132 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 BPNT1O95861 308 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 HEXAP06865 529 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 PTGFRP43088 359 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 MXD1Q05195 221 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 PDZK1IP1Q13113 114 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 DYNC1I2Q13409 638 aaKnown RBP11.71□□□□□ -0.53
UPK1A-202ENST00000379013 RSU1Q15404 277 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 SMIM21Q3B7S5 101 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 KRTAP21-3Q3LHN1 58 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 C1orf100Q5SVJ3 147 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 SFXN4Q6P4A7 337 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 OR51F2Q8NH61 342 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 TBC1D15Q8TC07 691 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 ACOT12Q8WYK0 555 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 AQP3Q92482 292 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 GTF3AQ92664 365 aaKnown RBP11.71□□□□□ -0.53
UPK1A-202ENST00000379013 SLC25A46Q96AG3 418 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 C12orf43Q96C57 262 aaKnown RBP11.71□□□□□ -0.53
UPK1A-202ENST00000379013 ORAI1Q96D31 301 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 MRPS24Q96EL2 167 aaKnown RBP11.71□□□□□ -0.53
UPK1A-202ENST00000379013 NAA50Q9GZZ1 169 aaKnown RBP11.71□□□□□ -0.53
UPK1A-202ENST00000379013 RBM38Q9H0Z9 239 aaKnown RBP11.71□□□□□ -0.53
UPK1A-202ENST00000379013 METTL9Q9H1A3 318 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 C1orf123Q9NWV4 160 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 RASL12Q9NYN1 266 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 IL36GQ9NZH8 169 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 RNF7Q9UBF6 113 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 STEAP1Q9UHE8 339 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 GLS2Q9UI32 602 aa11.71□□□□□ -0.53
UPK1A-202ENST00000379013 MRPS28Q9Y2Q9 187 aaKnown RBP11.71□□□□□ -0.53
UPK1A-202ENST00000379013 CLDN25C9JDP6 229 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 RNF223E7ERA6 249 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 CDIPTO14735 213 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 KDM4BO94953 1096 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 DAOP14920 347 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 ARSBP15848 533 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 ADRA2CP18825 462 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 DSCR9P59020 149 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 CLEC12BQ2HXU8 276 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 MZT2AQ6P582 158 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 SLC25A26Q70HW3 274 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 MOGAT3Q86VF5 341 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 ANGPTL5Q86XS5 388 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 FAM90A1Q86YD7 464 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 CEP19Q96LK0 163 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 SPACA5Q96QH8 159 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 CHODLQ9H9P2 273 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 ELL3Q9HB65 397 aaPredicted RBP11.7□□□□□ -0.54
UPK1A-202ENST00000379013 UFSP2Q9NUQ7 469 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 CCDC59Q9P031 241 aaKnown RBP11.7□□□□□ -0.54
UPK1A-202ENST00000379013 MXRA5Q9NR99 2828 aa11.7□□□□□ -0.54
UPK1A-202ENST00000379013 NDUFS8O00217 210 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 NOS1APO75052 506 aaPredicted RBP11.69□□□□□ -0.54
UPK1A-202ENST00000379013 SCGNO76038 276 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 NXPH2O95156 264 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 FSTL3O95633 263 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 PLATP00750 562 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 PGA5P0DJD9 388 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 CALCBP10092 127 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 CD37P11049 281 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 ZP1P60852 638 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 HNRNPA0Q13151 305 aaKnown RBP11.69□□□□□ -0.54
UPK1A-202ENST00000379013 DGUOKQ16854 277 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 PRAMEF6Q5VXH4 476 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 WDR82Q6UXN9 313 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 OR2W3Q7Z3T1 314 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 LINC00596Q86U02 117 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 PRIMA1Q86XR5 153 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 CALHM1Q8IU99 346 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 ZCCHC24Q8N2G6 241 aaKnown RBP11.69□□□□□ -0.54
UPK1A-202ENST00000379013 MUC20Q8N307 709 aaPredicted RBP11.69□□□□□ -0.54
UPK1A-202ENST00000379013 POC1AQ8NBT0 407 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 OR5D18Q8NGL1 313 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 KCNG3Q8TAE7 436 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 CCL17Q92583 94 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 RFT1Q96AA3 541 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 RNF167Q9H6Y7 350 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 CNTD2Q9H8S5 307 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 TMEM106BQ9NUM4 274 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 ABRACLQ9P1F3 81 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 DAPK2Q9UIK4 370 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 ETV7Q9Y603 341 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 CR1P17927 2039 aa11.69□□□□□ -0.54
UPK1A-202ENST00000379013 IGKV1-27A0A075B6S5 117 aa11.68□□□□□ -0.54
UPK1A-202ENST00000379013 A0A096LNT2 108 aa11.68□□□□□ -0.54
UPK1A-202ENST00000379013 TRAV38-1A0A0B4J264 116 aa11.68□□□□□ -0.54
UPK1A-202ENST00000379013 SRRM5B3KS81 715 aa11.68□□□□□ -0.54
UPK1A-202ENST00000379013 NCR1O76036 304 aa11.68□□□□□ -0.54
UPK1A-202ENST00000379013 LY6HO94772 140 aa11.68□□□□□ -0.54
UPK1A-202ENST00000379013 HPXP02790 462 aa11.68□□□□□ -0.54
UPK1A-202ENST00000379013 GTF2F2P13984 249 aa11.68□□□□□ -0.54
UPK1A-202ENST00000379013 MUC1P15941 1255 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms