RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 RAB27BO00194 218 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 EDN3P14138 238 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 GSK3AP49840 483 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 PLP2Q04941 152 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 RAB12Q6IQ22 244 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 C11orf87Q6NUJ2 197 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 CD163Q86VB7 1156 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 PNLDC1Q8NA58 520 aaKnown RBP16.81■□□□□ 0.28
SSU72-204ENST00000378726 WNT2BQ93097 391 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 PIGTQ969N2 578 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 MARC2Q969Z3 335 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 C1orf147Q96MC9 270 aaPredicted RBP16.81■□□□□ 0.28
SSU72-204ENST00000378726 VRK1Q99986 396 aaPredicted RBP16.81■□□□□ 0.28
SSU72-204ENST00000378726 TNFSF18Q9UNG2 199 aa16.81■□□□□ 0.28
SSU72-204ENST00000378726 DNASE2O00115 360 aaPredicted RBP16.8■□□□□ 0.28
SSU72-204ENST00000378726 XRCC2O43543 280 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 HLA-AP01891 365 aaKnown RBP16.8■□□□□ 0.28
SSU72-204ENST00000378726 PTGFRP43088 359 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 ARHGDIBP52566 201 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 SRSF4Q08170 494 aaKnown RBP16.8■□□□□ 0.28
SSU72-204ENST00000378726 PLEKHN1Q494U1 663 aaPredicted RBP16.8■□□□□ 0.28
SSU72-204ENST00000378726 LIN54Q6MZP7 749 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 CRIP3Q6Q6R5 217 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 SPACA3Q8IXA5 215 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 LINC00518Q8N0U6 118 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 C9orf106Q8NAJ2 232 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 OR5D18Q8NGL1 313 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 PDCD10Q9BUL8 212 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 WASF3Q9UPY6 502 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 APC2O95996 2303 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 KANTRA0A1W2PQU2 76 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 MKRN2OSH3BPM6 223 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 FGL1Q08830 312 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 ATXN7L3Q14CW9 347 aaPredicted RBP16.8■□□□□ 0.28
SSU72-204ENST00000378726 ELP2Q6IA86 826 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 ZNF585AQ6P3V2 769 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 MOB3CQ70IA8 216 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 CNEP1R1Q8N9A8 125 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 CHST4Q8NCG5 386 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 TMEM104Q8NE00 496 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 KCNG3Q8TAE7 436 aa16.8■□□□□ 0.28
SSU72-204ENST00000378726 hCG_38984A0A1B0GV85 526 aa16.79■□□□□ 0.28
SSU72-204ENST00000378726 SLC25A4P12235 298 aa16.79■□□□□ 0.28
SSU72-204ENST00000378726 EIF2S3P41091 472 aaKnown RBP16.79■□□□□ 0.28
SSU72-204ENST00000378726 GUSBP1Q15486 140 aa16.79■□□□□ 0.28
SSU72-204ENST00000378726 OR2W3Q7Z3T1 314 aa16.79■□□□□ 0.28
SSU72-204ENST00000378726 C1QL2Q7Z5L3 287 aa16.79■□□□□ 0.28
SSU72-204ENST00000378726 ZNF584Q8IVC4 421 aa16.79■□□□□ 0.28
SSU72-204ENST00000378726 BPIFCQ8NFQ6 507 aa16.79■□□□□ 0.28
SSU72-204ENST00000378726 CMBLQ96DG6 245 aa16.79■□□□□ 0.28
SSU72-204ENST00000378726 PCDHB16Q9NRJ7 776 aa16.79■□□□□ 0.28
SSU72-204ENST00000378726 TAS2R3Q9NYW6 316 aa16.79■□□□□ 0.28
SSU72-204ENST00000378726 BOD1L1Q8NFC6 3051 aa16.79■□□□□ 0.28
SSU72-204ENST00000378726 ARHGAP21Q5T5U3 1957 aa16.79■□□□□ 0.28
SSU72-204ENST00000378726 RNF222A6NCQ9 220 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 OR14I1A6ND48 311 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 BCL2L11O43521 198 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 MPIG6BO95866 241 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 ATP1B3P54709 279 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 ACSF3Q4G176 576 aaPredicted RBP16.78■□□□□ 0.28
SSU72-204ENST00000378726 SLC22A6Q4U2R8 563 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 DPPA2Q7Z7J5 298 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 PPP1R1CQ8WVI7 109 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 SPSB4Q96A44 273 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 MRGPRFQ96AM1 343 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 LRRC46Q96FV0 321 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 POM121L2Q96KW2 1035 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 BANF2Q9H503 90 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 LUZP4Q9P127 313 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 LHX6Q9UPM6 363 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 A0A1W2PP11 408 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 OR2F2O95006 317 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 PLATP00750 562 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 ZBTB25P24278 435 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 KIR2DL2P43627 348 aaPredicted RBP16.78■□□□□ 0.28
SSU72-204ENST00000378726 DEFA5Q01523 94 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 OR2F1Q13607 317 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 CDNFQ49AH0 187 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 RPUSD3Q6P087 351 aaKnown RBP16.78■□□□□ 0.28
SSU72-204ENST00000378726 FJX1Q86VR8 437 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 GVQW1Q8N7I0 195 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 ABHD17AQ96GS6 310 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 ZNF471Q9BX82 626 aaPredicted RBP16.78■□□□□ 0.28
SSU72-204ENST00000378726 LPAR5Q9H1C0 372 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 COMMD9Q9P000 198 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 MSRB2Q9Y3D2 182 aa16.78■□□□□ 0.28
SSU72-204ENST00000378726 FAM74A7A6NL05 159 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 DISC1C4P0D8 188 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 CDC14BO60729 498 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 CRTAPO75718 401 aaPredicted RBP16.77■□□□□ 0.28
SSU72-204ENST00000378726 NRASP01111 189 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 CHRM2P08172 466 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 NAT2P11245 290 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 IGHV1-2P23083 117 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 MTCP1P56278 107 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 CXADRP78310 365 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 TGFBR3Q03167 851 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 PPP1R1AQ13522 171 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 ZNF345Q14585 488 aa16.77■□□□□ 0.28
SSU72-204ENST00000378726 OR8B8Q15620 311 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms