RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 NAT8Q9UHE5 227 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 ST3GAL6Q9Y274 331 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 CACNA1CQ13936 2221 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 TNFRSF10CO14798 259 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 CHRM2P08172 466 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 VEGFBP49765 207 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 LY6G6FQ5SQ64 297 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 RSPO2Q6UXX9 243 aaPredicted RBP10.5□□□□□ -0.73
NPHP4-202ENST00000378161 OR4N5Q8IXE1 308 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 CISD2Q8N5K1 135 aaKnown RBP10.5□□□□□ -0.73
NPHP4-202ENST00000378161 RARRES2Q99969 163 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 SGIP1Q9BQI5 828 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 SIRT4Q9Y6E7 314 aaPredicted RBP10.5□□□□□ -0.73
NPHP4-202ENST00000378161 DOCK5Q9H7D0 1870 aa10.5□□□□□ -0.73
NPHP4-202ENST00000378161 HCRTR1O43613 425 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 TNFSF15O95150 251 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 ZNF90Q03938 601 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 PRDX1Q06830 199 aaKnown RBP10.49□□□□□ -0.73
NPHP4-202ENST00000378161 ABHD5Q8WTS1 349 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 SPACA9Q96E40 222 aaPredicted RBP10.49□□□□□ -0.73
NPHP4-202ENST00000378161 SLC17A5Q9NRA2 495 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 SLC39A9Q9NUM3 307 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 MCM3APO60318 1980 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 GRXCR1A8MXD5 290 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 C1QL1O75973 258 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 CLDN18P56856 261 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 DMKNQ6E0U4 476 aaPredicted RBP10.49□□□□□ -0.73
NPHP4-202ENST00000378161 ZNF765Q7L2R6 523 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 OR1N2Q8NGR9 330 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 SYT3Q9BQG1 590 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 YBX2Q9Y2T7 364 aaKnown RBP10.49□□□□□ -0.73
NPHP4-202ENST00000378161 MRPS2Q9Y399 296 aaKnown RBP10.49□□□□□ -0.73
NPHP4-202ENST00000378161 OR51B2Q9Y5P1 312 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 C1QCP02747 245 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 ESDP10768 282 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 RPS4Y1P22090 263 aaKnown RBP10.49□□□□□ -0.73
NPHP4-202ENST00000378161 PPP1CCP36873 323 aaKnown RBP10.49□□□□□ -0.73
NPHP4-202ENST00000378161 SOX8P57073 446 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 TGFBR3Q03167 851 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 PCK2Q16822 640 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 C2orf76Q3KRA6 126 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 KCTD18Q6PI47 426 aaPredicted RBP10.49□□□□□ -0.73
NPHP4-202ENST00000378161 LILRA3Q8N6C8 439 aaPredicted RBP10.49□□□□□ -0.73
NPHP4-202ENST00000378161 ARRDC3Q96B67 414 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 C9JQL5 133 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 B4GALT2O60909 372 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 FAM157CP0CG43 387 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 PI3P19957 117 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 KITLGP21583 273 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 HSD11B2P80365 405 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 HLA-BQ31612 363 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 ZNF770Q6IQ21 691 aaPredicted RBP10.49□□□□□ -0.73
NPHP4-202ENST00000378161 BIVMQ86UB2 503 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 NR2C2APQ86WQ0 139 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 LGI3Q8N145 548 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 TM4SF18Q96CE8 201 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 TMEM121BQ9BXQ6 578 aaPredicted RBP10.49□□□□□ -0.73
NPHP4-202ENST00000378161 SLC2A4RGQ9NR83 387 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 B3GALT1Q9Y5Z6 326 aa10.49□□□□□ -0.73
NPHP4-202ENST00000378161 CTAG2O75638 210 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 WISP3O95389 354 aaPredicted RBP10.48□□□□□ -0.73
NPHP4-202ENST00000378161 DANCRP0C864 163 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 HNRNPA2B1P22626 353 aaKnown RBP10.48□□□□□ -0.73
NPHP4-202ENST00000378161 HRH1P35367 487 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 AMMECR1LQ6DCA0 310 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 C16orf82Q7Z2V1 217 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 PLSCR4Q9NRQ2 329 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 CENPMQ9NSP4 180 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 FOXD3Q9UJU5 478 aaPredicted RBP10.48□□□□□ -0.73
NPHP4-202ENST00000378161 SRPK3Q9UPE1 567 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 PTPRZ1P23471 2315 aaPredicted RBP10.48□□□□□ -0.73
NPHP4-202ENST00000378161 A0A1W2PP55 124 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 GDF9O60383 454 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 FOXL2P58012 376 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 ZNF385BQ569K4 471 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 FAM78BQ5VT40 261 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 APCDD1LQ8NCL9 501 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 OR5B3Q8NH48 314 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 DSPPQ9NZW4 1301 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 PIKFYVEQ9Y2I7 2098 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 SFT2D2O95562 160 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 PTGER1P34995 402 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 OPRD1P41143 372 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 SCAND1P57086 179 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 RND3P61587 244 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 DUSP5Q16690 384 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 ITPRIPL2Q3MIP1 535 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 C1orf122Q6ZSJ8 110 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 ADGRE4PQ86SQ3 457 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 ANAPC16Q96DE5 110 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 SLC25A38Q96DW6 304 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 TMED7Q9Y3B3 224 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 PPIAL4AQ9Y536 164 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 OR1A2Q9Y585 309 aa10.48□□□□□ -0.73
NPHP4-202ENST00000378161 MAP1BP46821 2468 aaKnown RBP10.48□□□□□ -0.73
NPHP4-202ENST00000378161 CEP290O15078 2479 aa10.47□□□□□ -0.73
NPHP4-202ENST00000378161 H3BNC9 293 aa10.47□□□□□ -0.73
NPHP4-202ENST00000378161 APOBEC3AP31941 199 aaPredicted RBP10.47□□□□□ -0.73
NPHP4-202ENST00000378161 TIAL1Q01085 375 aaKnown RBP eCLIP10.47□□□□□ -0.73
NPHP4-202ENST00000378161 PDE7AQ13946 482 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms