RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 PMS2P11Q13670 270 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 MRGPREQ86SM8 312 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 C9orf62Q8N4C0 152 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 ANKRD20A5PA0PJZ0 165 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 SPP1P10451 314 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 EIF3IQ13347 325 aaKnown RBP10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 HFEQ30201 348 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 NCMAPQ5T1S8 102 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 OR11H7Q8NGC8 314 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 ZNF835Q9Y2P0 537 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 CD200P41217 278 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 RHOBP62745 196 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 ZNF117Q03924 483 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 RAB32Q13637 225 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 TSEN54Q7Z6J9 526 aaKnown RBP10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 ADPRHL1Q8NDY3 354 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 C17orf47Q8NEP4 570 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 OR10V1Q8NGI7 309 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 PTPMT1Q8WUK0 201 aaPredicted RBP10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 PRR13Q9NZ81 148 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 TMIGD3P0DMS9 266 aaPredicted RBP10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 USF1P22415 310 aaPredicted RBP10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 BPIFB3P59826 476 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 OR5I1Q13606 314 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 MRM1Q6IN84 353 aaKnown RBP10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 CT55Q8WUE5 264 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 MS4A7Q9GZW8 240 aaPredicted RBP10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 FBXO34Q9NWN3 711 aa10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 DNAJB12Q9NXW2 375 aaKnown RBP10.7□□□□□ -0.7
PCDHA9-201ENST00000378122 SERPINE3A8MV23 424 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 CD3EP07766 207 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 CT45A10P0DMU9 189 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 BVESQ8NE79 360 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 OR4D10Q8NGI6 311 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 PELI1Q96FA3 418 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 IGHA2P01877 340 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 ERHP84090 104 aaKnown RBP10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 WIPI1Q5MNZ9 446 aaPredicted RBP10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 SPINK14Q6IE38 97 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 ZNF574Q6ZN55 896 aaPredicted RBP10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 TUSC5Q8IXB3 177 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 GALP22466 123 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 GTF2H5Q6ZYL4 71 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 CIB3Q96Q77 187 aaPredicted RBP10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 C19orf57Q0VDD7 668 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 LSRQ86X29 649 aaPredicted RBP10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 DUSP18Q8NEJ0 188 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 SLC17A5Q9NRA2 495 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 MTFP1Q9UDX5 166 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 H3BMH7 237 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 IGF2P01344 180 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 SLC25A1P53007 311 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 FFAR4Q5NUL3 377 aa10.69□□□□□ -0.7
PCDHA9-201ENST00000378122 TTC3P53804 2025 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 BRWD1Q9NSI6 2320 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 DEFB108AA8MXU0 73 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 MPC2O95563 127 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 RBP4P02753 201 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 CCL2P13500 99 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 ABCD3P28288 659 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 SLC35B3Q9H1N7 401 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 DBX1A6NMT0 343 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 GALR2O43603 387 aaPredicted RBP10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 NTN1O95631 604 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 SLC37A1P57057 533 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 FAM162BQ5T6X4 162 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 UBE3DQ7Z6J8 389 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 MOB3AQ96BX8 217 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 GALMQ96C23 342 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 VN1R1Q9GZP7 353 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 TIMM9Q9Y5J7 89 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 SULT1A3P0DMM9 295 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 SULT1A4P0DMN0 295 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 CEBPDP49716 269 aaPredicted RBP10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 PRICKLE4Q2TBC4 344 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 Q56UQ5 140 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 SPINK9Q5DT21 86 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 TMEM92Q6UXU6 159 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 FAAP24Q9BTP7 215 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 HIST1H1DP16402 221 aaKnown RBP10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 CXCL3P19876 107 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 ERVS71-1P61550 626 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 HIST1H3AP68431 136 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 RNASEKQ6P5S7 137 aaKnown RBP10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 GVQW1Q8N7I0 195 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 HMSDA8MTL9 139 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 MASP2O00187 686 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 MYPOPQ86VE0 399 aaPredicted RBP10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 MMP25Q9NPA2 562 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 TDRD6O60522 2096 aaKnown RBP10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 SPINK4O60575 86 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 ZFPL1O95159 310 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 CTGFP29279 349 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 FGF8P55075 233 aaPredicted RBP10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 PRSS12P56730 875 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 IL21Q9HBE4 155 aa10.68□□□□□ -0.7
PCDHA9-201ENST00000378122 ZNHIT1O43257 154 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 DHHO43323 396 aa10.67□□□□□ -0.7
PCDHA9-201ENST00000378122 C1QAP02745 245 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms