RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 ZNF230Q9UIE0 474 aaPredicted RBP11.1□□□□□ -0.63
TRIM40-206ENST00000376724 ZNF222Q9UK12 451 aa11.1□□□□□ -0.63
TRIM40-206ENST00000376724 GEMIN2O14893 280 aaKnown RBP11.09□□□□□ -0.63
TRIM40-206ENST00000376724 IGKV3-15P01624 115 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 ZNF735P0CB33 412 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 TIMP3P35625 211 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 HTR2BP41595 481 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 NPBWR2P48146 333 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 TDGF1P3P51864 188 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 SNU13P55769 128 aaKnown RBP11.09□□□□□ -0.63
TRIM40-206ENST00000376724 UCP2P55851 309 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 P2RY6Q15077 328 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 IGFBP7Q16270 282 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 PRR30Q53SZ7 412 aaPredicted RBP11.09□□□□□ -0.63
TRIM40-206ENST00000376724 ASCL4Q6XD76 172 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 PXT1Q8NFP0 134 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 SLC25A40Q8TBP6 338 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 MAFIPQ8WZ33 124 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 SNAPC3Q92966 411 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 FBXW5Q969U6 566 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 SLAMF9Q96A28 289 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 ZNF107Q9UII5 783 aaPredicted RBP11.09□□□□□ -0.63
TRIM40-206ENST00000376724 ST3GAL6Q9Y274 331 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 PIEZO2Q9H5I5 2752 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 DISC1C4P0D8 188 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 PRRG2O14669 202 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 CRHP06850 196 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 AP2S1P53680 142 aaPredicted RBP11.09□□□□□ -0.63
TRIM40-206ENST00000376724 BRICD5Q6PL45 260 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 ZNF474Q6S9Z5 364 aaPredicted RBP11.09□□□□□ -0.63
TRIM40-206ENST00000376724 GFRALQ6UXV0 394 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 OR11H7Q8NGC8 314 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 OR52B4Q8NGK2 314 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 OR4K15Q8NH41 348 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 SNRNP40Q96DI7 357 aaKnown RBP11.09□□□□□ -0.63
TRIM40-206ENST00000376724 CITED4Q96RK1 184 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 FAAP24Q9BTP7 215 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 NPDC1Q9NQX5 325 aaPredicted RBP11.09□□□□□ -0.63
TRIM40-206ENST00000376724 ZNF69Q9UC07 566 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 SCP2D1Q9UJQ7 156 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 PLEKHA6Q9Y2H5 1048 aa11.09□□□□□ -0.63
TRIM40-206ENST00000376724 A0A1B0GUH1 482 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 SMLR1H3BR10 107 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 PRAF2O60831 178 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 IFNA6P05013 189 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 CECR9P0C854 216 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 BCL3P20749 454 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 BMP5P22003 454 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 MEF2DQ14814 521 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 METTL11BQ5VVY1 283 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 GLDNQ6ZMI3 551 aaPredicted RBP11.08□□□□□ -0.64
TRIM40-206ENST00000376724 DOLPP1Q86YN1 238 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 OR5A2Q8NGI9 324 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 OR5P3Q8WZ94 311 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 ST8SIA4Q92187 359 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 ZNF701Q9NV72 531 aaPredicted RBP11.08□□□□□ -0.64
TRIM40-206ENST00000376724 ASF1BQ9NVP2 202 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 TINAGQ9UJW2 476 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 DSPP15924 2871 aaKnown RBP11.08□□□□□ -0.64
TRIM40-206ENST00000376724 OR5H1A6NKK0 313 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 SERPINE3A8MV23 424 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 VSIG10L2P0DP72 767 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 GLI4P10075 376 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 CXCL3P19876 107 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 MICBQ29980 383 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 EIF2S3LQ2VIR3 472 aaKnown RBP11.08□□□□□ -0.64
TRIM40-206ENST00000376724 ALKBH6Q3KRA9 238 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 CD276Q5ZPR3 534 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 FBXW12Q6X9E4 464 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 TMED4Q7Z7H5 227 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 C17orf78Q8N4C9 275 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 BOD1Q96IK1 185 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 OCSTAMPQ9BR26 566 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 HDHD3Q9BSH5 251 aaPredicted RBP11.08□□□□□ -0.64
TRIM40-206ENST00000376724 CHST6Q9GZX3 395 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 PCDHB16Q9NRJ7 776 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 IL36GQ9NZH8 169 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 MPC1Q9Y5U8 109 aa11.08□□□□□ -0.64
TRIM40-206ENST00000376724 EEF1E1-BLOC1S5C9J1V9 151 aa11.07□□□□□ -0.64
TRIM40-206ENST00000376724 J3QW42 95 aa11.07□□□□□ -0.64
TRIM40-206ENST00000376724 CTRB1P17538 263 aa11.07□□□□□ -0.64
TRIM40-206ENST00000376724 AMY2BP19961 511 aa11.07□□□□□ -0.64
TRIM40-206ENST00000376724 CEACAM8P31997 349 aaPredicted RBP11.07□□□□□ -0.64
TRIM40-206ENST00000376724 UCNP55089 124 aa11.07□□□□□ -0.64
TRIM40-206ENST00000376724 MAB21L1Q13394 359 aa11.07□□□□□ -0.64
TRIM40-206ENST00000376724 CTRB2Q6GPI1 263 aa11.07□□□□□ -0.64
TRIM40-206ENST00000376724 HAGHLQ6PII5 290 aaPredicted RBP11.07□□□□□ -0.64
TRIM40-206ENST00000376724 LIX1LQ8IVB5 337 aa11.07□□□□□ -0.64
TRIM40-206ENST00000376724 ZSCAN4Q8NAM6 433 aaPredicted RBP11.07□□□□□ -0.64
TRIM40-206ENST00000376724 OR10AD1Q8NGE0 317 aa11.07□□□□□ -0.64
TRIM40-206ENST00000376724 DYRK2Q92630 601 aa11.07□□□□□ -0.64
TRIM40-206ENST00000376724 MARVELD3Q96A59 401 aa11.07□□□□□ -0.64
TRIM40-206ENST00000376724 S100PBPQ96BU1 408 aa11.07□□□□□ -0.64
TRIM40-206ENST00000376724 GPN1Q9HCN4 374 aaPredicted RBP11.07□□□□□ -0.64
TRIM40-206ENST00000376724 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.07□□□□□ -0.64
TRIM40-206ENST00000376724 FZR1Q9UM11 496 aa11.07□□□□□ -0.64
TRIM40-206ENST00000376724 SPTBN4Q9H254 2564 aa11.07□□□□□ -0.64
TRIM40-206ENST00000376724 PTPRQQ9UMZ3 2332 aa11.06□□□□□ -0.64
TRIM40-206ENST00000376724 IGHV1-18A0A0C4DH31 117 aa11.06□□□□□ -0.64
TRIM40-206ENST00000376724 TMEM82A0PJX8 343 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms