RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 OR10G4Q8NGN3 311 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 OR10G9Q8NGN4 311 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 OR10G7Q8NGN6 311 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 SPSB1Q96BD6 273 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 CDC42EP3Q9UKI2 254 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 OR5B21A6NL26 309 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 IFITM10A6NMD0 228 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 LINC01387J3KSC0 135 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 HMGN4O00479 90 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 ERVS71-1P61550 626 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 WFDC8Q8IUA0 241 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 RBM45Q8IUH3 476 aaKnown RBP10.47□□□□□ -0.73
VPS13A-205ENST00000376636 HDGFL3Q9Y3E1 203 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 RNASE1P07998 156 aaKnown RBP10.47□□□□□ -0.73
VPS13A-205ENST00000376636 BRS3P32247 399 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 DPPA3Q6W0C5 159 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 BCORP1Q8N888 145 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 LPAR5Q9H1C0 372 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 ACER3Q9NUN7 267 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 FER1L5A0AVI2 2057 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 F5P12259 2224 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 M0R296 226 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 GALP22466 123 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 SCAND1P57086 179 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 C19orf54Q5BKX5 351 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 VWA2Q5GFL6 755 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 SLC25A22Q9H936 323 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 MSL2Q9HCI7 577 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 ZNF749O43361 778 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 RPL18Q07020 188 aaKnown RBP10.47□□□□□ -0.73
VPS13A-205ENST00000376636 ADTRPQ96IZ2 230 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 AUNIPQ9H7T9 357 aa10.47□□□□□ -0.73
VPS13A-205ENST00000376636 PYCARD-AS1I3L0S3 204 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 CSN3P07498 182 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 SLC19A1P41440 591 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 FABP5Q01469 135 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 ZNF252P-AS1Q0IIN9 211 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 TMEM215Q68D42 235 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 C6orf15Q6UXA7 325 aaPredicted RBP10.46□□□□□ -0.73
VPS13A-205ENST00000376636 STXBP6Q8NFX7 210 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 HMSDA8MTL9 139 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 PRKRAO75569 313 aaKnown RBP10.46□□□□□ -0.73
VPS13A-205ENST00000376636 VSTM2AQ8TAG5 236 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 SNRNP40Q96DI7 357 aaKnown RBP10.46□□□□□ -0.73
VPS13A-205ENST00000376636 SLC25A19Q9HC21 320 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 PSG11Q9UQ72 335 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 SCN5AQ14524 2016 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 TARM1B6A8C7 271 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 H0YIG0 161 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 TIMP1P01033 207 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 PPIAP62937 165 aaKnown RBP10.46□□□□□ -0.73
VPS13A-205ENST00000376636 FAM221AA4D161 298 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 POLR2IP36954 125 aaKnown RBP10.46□□□□□ -0.73
VPS13A-205ENST00000376636 TMEFF1Q8IYR6 380 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 ZNF740Q8NDX6 193 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 SPACA9Q96E40 222 aaPredicted RBP10.46□□□□□ -0.73
VPS13A-205ENST00000376636 ELFN2Q5R3F8 820 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 ZNF385DQ9H6B1 395 aa10.46□□□□□ -0.73
VPS13A-205ENST00000376636 INHBBP09529 407 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 WNT3P56703 355 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 HFEQ30201 348 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 BSXQ3C1V8 233 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 RPS19BP1Q86WX3 136 aaKnown RBP10.46□□□□□ -0.74
VPS13A-205ENST00000376636 TMEM140Q9NV12 185 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 SLC37A1P57057 533 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 SPRED3Q2MJR0 410 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 PELI3Q8N2H9 469 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 OR5M1Q8NGP8 315 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 VN1R17PQ8TDU5 208 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 DERL3Q96Q80 235 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 K7EQS6 105 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 PPP6CO00743 305 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 CTF1Q16619 201 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 CGB2Q6NT52 195 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 LRRC3BQ96PB8 259 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 GABRG3Q99928 467 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 JMJD6Q6NYC1 403 aaPredicted RBP10.46□□□□□ -0.74
VPS13A-205ENST00000376636 FGF13Q92913 245 aa10.46□□□□□ -0.74
VPS13A-205ENST00000376636 INSM1Q01101 510 aaPredicted RBP10.45□□□□□ -0.74
VPS13A-205ENST00000376636 TAS1R1Q7RTX1 841 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 MORN4Q8NDC4 146 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 BADQ92934 168 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 ZNF764Q96H86 408 aaPredicted RBP10.45□□□□□ -0.74
VPS13A-205ENST00000376636 TMEM204Q9BSN7 226 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 GPX5O75715 221 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 NKAIN1Q4KMZ8 207 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 TMEM183AQ8IXX5 376 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 DEFB108BQ8NET1 73 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 SGK494Q96LW2 274 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 SPACA5Q96QH8 159 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 PAAF1Q9BRP4 392 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 LYZP61626 148 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 TMEM99Q8N816 258 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 FAHD2AQ96GK7 314 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 A0A096LPE4 126 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 A0A1W2PPZ6 126 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 DIRC3C9JPN6 131 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 HOXD9P28356 352 aaPredicted RBP10.45□□□□□ -0.74
VPS13A-205ENST00000376636 PAFAH1B2P68402 229 aa10.45□□□□□ -0.74
VPS13A-205ENST00000376636 LINC00303Q3SY05 128 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms