RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	SSX4	O60224	188 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	MPV17	P39210	176 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	PLA2G7	Q13093	441 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	MICB	Q29980	383 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	UBE2NL	Q5JXB2	153 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	H3F3C	Q6NXT2	135 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	TMEM123	Q8N131	208 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	SLIRP	Q9GZT3	109 aa	Known RBP	11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	MOB1A	Q9H8S9	216 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	RAB22A	Q9UL26	194 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	CACNG2	Q9Y698	323 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	MED12L	Q86YW9	2145 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	MSTN	O14793	375 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	ACTB	P60709	375 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	ACTG1	P63261	375 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	NSUN5P2	Q63ZY6	315 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	RNF144B	Q7Z419	303 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	ABHD1	Q96SE0	405 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	SEC22C	Q9BRL7	303 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	OCEL1	Q9H607	264 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	PROB1	E7EW31	1015 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	UPK1B	O75841	260 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	TK1	P04183	234 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	OR8U9	P0C7N5	309 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	RAC2	P15153	192 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	RPS16	P62249	146 aa	Known RBP	11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	HFE	Q30201	348 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	THOC7	Q6I9Y2	204 aa	Known RBP	11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	C1QL2	Q7Z5L3	287 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	OR8U1	Q8NH10	309 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	OIT3	Q8WWZ8	545 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	C22orf15	Q8WYQ4	148 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	NMNAT2	Q9BZQ4	307 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	ZDHHC11	Q9H8X9	412 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	PRR13	Q9NZ81	148 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	A3GALT2	U3KPV4	340 aa		11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	FN1	P02751	2386 aa	Known RBP	11.7	□□□□□ -0.54
DDR1-225	ENST00000376568	TMEM272	A0A1B0GTI8	110 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	OR14I1	A6ND48	311 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	BOLA2-SMG1P6	H3BVE0	249 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	SLC17A2	O00624	439 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	IFI6	P09912	130 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	ANXA7	P20073	488 aa	Known RBP	11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	FUT6	P51993	359 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	UBE2V2	Q15819	145 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	NKAIN3	Q8N8D7	197 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	OR10S1	Q8NGN2	331 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	IL36RN	Q9UBH0	155 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	IGHV3OR16-10	A0A075B7F0	116 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	RAF1	P04049	648 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	HRH1	P35367	487 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	SP6	Q3SY56	376 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	C9orf152	Q5JTZ5	239 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	STEAP1B	Q6NZ63	245 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	DEGS2	Q6QHC5	323 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	HAVCR2	Q8TDQ0	301 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	PERP	Q96FX8	193 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	CCL13	Q99616	98 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	CHODL	Q9H9P2	273 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	RNF122	Q9H9V4	155 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	MGAT4C	Q9UBM8	478 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	KIF25	Q9UIL4	384 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	RHBDL1	O75783	438 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	IL18BP	O95998	194 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	CPN1	P15169	458 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	BCL2A1	Q16548	175 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	ZFP69	Q49AA0	526 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	ZNF474	Q6S9Z5	364 aa	Predicted RBP	11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	FAM58A	Q8N1B3	248 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	PP6455	Q8WZ26	134 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	CA10	Q9NS85	328 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	POLDIP2	Q9Y2S7	368 aa		11.69	□□□□□ -0.54
DDR1-225	ENST00000376568	SMLR1	H3BR10	107 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	OGG1	O15527	345 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	GSTP1	P09211	210 aa	Known RBP	11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	CHRNB4	P30926	498 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	THBS4	P35443	961 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	MMP15	P51511	669 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	FAM189A2	Q15884	450 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	WFIKKN1	Q96NZ8	548 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	NAAA	Q02083	359 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	AES	Q08117	197 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	ARL11	Q969Q4	196 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	SH2D1B	O14796	132 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	GYPA	P02724	150 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	ADRA2C	P18825	462 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	MOGAT2	Q3SYC2	334 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	RAB40A	Q8WXH6	277 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	RGP1	Q92546	391 aa	Predicted RBP	11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	TIMD4	Q96H15	378 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	PGLYRP3	Q96LB9	341 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	SNX18	Q96RF0	628 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	ZNF286A	Q9HBT8	521 aa		11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	YLPM1	P49750	1951 aa	Known RBP	11.68	□□□□□ -0.54
DDR1-225	ENST00000376568	LILRA1	O75019	489 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	ACTL6B	O94805	426 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	PLAU	P00749	431 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	SERPINE2	P07093	398 aa		11.67	□□□□□ -0.54
DDR1-225	ENST00000376568	EVX1	P49640	407 aa		11.67	□□□□□ -0.54

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