RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 NRASP01111 189 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 RPS2P15880 293 aaKnown RBP10.09□□□□□ -0.79
LSM2-208ENST00000375661 TPBGQ13641 420 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 PDCD1Q15116 288 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 UBE2V2Q15819 145 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 CEACAM21Q3KPI0 293 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 FAM76BQ5HYJ3 339 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 CEP78Q5JTW2 689 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 CLVS2Q5SYC1 327 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 ASPHD2Q6ICH7 369 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 ZNF773Q6PK81 442 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 BRICD5Q6PL45 260 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 Q6YL49 198 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 MOGAT3Q86VF5 341 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 C11orf53Q8IXP5 236 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 KIR3DL3Q8N743 410 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 OR13C3Q8NGS6 347 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 OR13C5Q8NGS8 318 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 GPR148Q8TDV2 347 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 TAF15Q92804 592 aaKnown RBP eCLIP10.09□□□□□ -0.79
LSM2-208ENST00000375661 C10orf35Q96D05 121 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 NEIL1Q96FI4 390 aaPredicted RBP10.09□□□□□ -0.79
LSM2-208ENST00000375661 RNF170Q96K19 258 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 MICU1Q9BPX6 476 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 CHST5Q9GZS9 411 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 PLEKHA1Q9HB21 404 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 ABCB9Q9NP78 766 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 ISYNA1Q9NPH2 558 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 POMT1Q9Y6A1 747 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 CMYA5Q8N3K9 4069 aa10.09□□□□□ -0.79
LSM2-208ENST00000375661 IGHV3OR16-10A0A075B7F0 116 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 IGKV1-9A0A0C4DH69 117 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.08□□□□□ -0.8
LSM2-208ENST00000375661 ANKRD61A6NGH8 418 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 GRPP07492 148 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 RPSAP08865 295 aaKnown RBP10.08□□□□□ -0.8
LSM2-208ENST00000375661 HSMCR30P0CW71 290 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 SOX2P48431 317 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 MLLT11Q13015 90 aaPredicted RBP10.08□□□□□ -0.8
LSM2-208ENST00000375661 ZNF181Q2M3W8 571 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 DEFB112Q30KQ8 113 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 YIF1BQ5BJH7 314 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 GPR157Q5UAW9 335 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 PLCXD3Q63HM9 321 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 FIP1L1Q6UN15 594 aaKnown RBP10.08□□□□□ -0.8
LSM2-208ENST00000375661 NLRC3Q7RTR2 1065 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 ZNF367Q7RTV3 350 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 SVOPQ8N4V2 548 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 PARP16Q8N5Y8 322 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 OR1M1Q8NGA1 313 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 OR5A2Q8NGI9 324 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 Q8TCH9 128 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 HIST1H2AAQ96QV6 131 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 MGLLQ99685 303 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 TLNRD1Q9H1K6 362 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 TMEM165Q9HC07 324 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 UFSP2Q9NUQ7 469 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 C14orf119Q9NWQ9 140 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 C1RLQ9NZP8 487 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 DHDHQ9UQ10 334 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 WNK1Q9H4A3 2382 aa10.08□□□□□ -0.8
LSM2-208ENST00000375661 MDFIC2A0A1B0GVS7 189 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 ZNF732B4DXR9 585 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 TNFAIP8O95379 198 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 ZNF20P17024 532 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 ATF1P18846 271 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 GPM6AP51674 278 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 GNG3P63215 75 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 SRSF4Q08170 494 aaKnown RBP10.07□□□□□ -0.8
LSM2-208ENST00000375661 MZT1Q08AG7 82 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 GPR50Q13585 617 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 UBE2UQ5VVX9 321 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 LIPKQ5VXJ0 399 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 ZNF826PQ6ZT77 177 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 UTS2BQ765I0 119 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 C1orf87Q8N0U7 546 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 OR8B3Q8NGG8 313 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 TSEN15Q8WW01 171 aaKnown RBP10.07□□□□□ -0.8
LSM2-208ENST00000375661 PP6455Q8WZ26 134 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 UFD1Q92890 307 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 ERGIC1Q969X5 290 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 OR8B2Q96RD0 313 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 RTL8AQ9BWD3 113 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 OR51I2Q9H344 312 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 ZCCHC4Q9H5U6 513 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 C1orf123Q9NWV4 160 aa10.07□□□□□ -0.8
LSM2-208ENST00000375661 SF3B6Q9Y3B4 125 aaKnown RBP10.07□□□□□ -0.8
LSM2-208ENST00000375661 SOX21Q9Y651 276 aaPredicted RBP10.07□□□□□ -0.8
LSM2-208ENST00000375661 PRKDCP78527 4128 aaKnown RBP10.06□□□□□ -0.8
LSM2-208ENST00000375661 TRBV5-7A0A0A0MS05 114 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 PQLC2LA1A4F0 135 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 OR5B21A6NL26 309 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 TMEM210A6NLX4 147 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 LRRC30A6NM36 301 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 GATBO75879 557 aaKnown RBP10.06□□□□□ -0.8
LSM2-208ENST00000375661 CLPXO76031 633 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 INMTO95050 263 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 CYB5R3P00387 301 aaPredicted RBP10.06□□□□□ -0.8
LSM2-208ENST00000375661 SERPINA3P01011 423 aa10.06□□□□□ -0.8
LSM2-208ENST00000375661 OCM2P0CE71 109 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms