RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 PDCD6O75340 191 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 GABRA1P14867 456 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 AADACP22760 399 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 NAA40Q86UY6 237 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 OR5B12Q96R08 314 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 CNTNAP3Q9BZ76 1288 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 FAM117AQ9C073 453 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 MSL2Q9HCI7 577 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 ZNF407Q9C0G0 2248 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 TRAV39A0A0B4J263 110 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 TMEM127O75204 238 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 RFPL3SP0C7P2 107 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 TMEM108Q6UXF1 575 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 CDH26Q8IXH8 852 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 OR10X1Q8NGY0 326 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 GPX8Q8TED1 209 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 HAS2Q92819 552 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 CHRNA10Q9GZZ6 450 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 HIPK2Q9H2X6 1198 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 SLC17A5Q9NRA2 495 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 PCNX2A6NKB5 2137 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 LANCL1O43813 399 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 SSSCA1O60232 199 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 IAPPP10997 89 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 IFITM3Q01628 133 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 OR2W3Q7Z3T1 314 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 TECTBQ96PL2 329 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 NEUROG3Q9Y4Z2 214 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 KRASP01116 189 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 S100PP25815 95 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 ZNF79Q15937 498 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 MICBQ29980 383 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 MUC20Q8N307 709 aaPredicted RBP15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 MSI2Q96DH6 328 aaKnown RBP15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 CMTM3Q96MX0 182 aa15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 MRPL22Q9NWU5 206 aaKnown RBP15.78■□□□□ 0.12
PTPDC1-202ENST00000375360 ADAM10O14672 748 aa15.77■□□□□ 0.12
PTPDC1-202ENST00000375360 GEMIN2O14893 280 aaKnown RBP15.77■□□□□ 0.12
PTPDC1-202ENST00000375360 LIMK1P53667 647 aa15.77■□□□□ 0.12
PTPDC1-202ENST00000375360 DHRS2Q13268 280 aa15.77■□□□□ 0.12
PTPDC1-202ENST00000375360 PPP1R1AQ13522 171 aa15.77■□□□□ 0.12
PTPDC1-202ENST00000375360 RNF141Q8WVD5 230 aa15.77■□□□□ 0.12
PTPDC1-202ENST00000375360 TRIM64BA6NI03 449 aa15.77■□□□□ 0.12
PTPDC1-202ENST00000375360 ZNF17P17021 662 aa15.77■□□□□ 0.12
PTPDC1-202ENST00000375360 ZP4Q12836 540 aa15.77■□□□□ 0.12
PTPDC1-202ENST00000375360 PLA1AQ53H76 456 aa15.77■□□□□ 0.12
PTPDC1-202ENST00000375360 NLRC3Q7RTR2 1065 aa15.77■□□□□ 0.12
PTPDC1-202ENST00000375360 LRRC29Q8WV35 223 aa15.77■□□□□ 0.12
PTPDC1-202ENST00000375360 A0A1W2PP11 408 aa15.77■□□□□ 0.11
PTPDC1-202ENST00000375360 ZNF816Q0VGE8 651 aaPredicted RBP15.77■□□□□ 0.11
PTPDC1-202ENST00000375360 TESK1Q15569 626 aa15.77■□□□□ 0.11
PTPDC1-202ENST00000375360 SUMF2Q8NBJ7 301 aa15.77■□□□□ 0.11
PTPDC1-202ENST00000375360 KCNK17Q96T54 332 aa15.77■□□□□ 0.11
PTPDC1-202ENST00000375360 SLC39A9Q9NUM3 307 aa15.77■□□□□ 0.11
PTPDC1-202ENST00000375360 PUS1Q9Y606 427 aaKnown RBP eCLIP15.77■□□□□ 0.11
PTPDC1-202ENST00000375360 DNPH1O43598 174 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 CNIH1O95406 144 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 VSIG8P0DPA2 414 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 ELLP55199 621 aaPredicted RBP15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 RAB4BP61018 213 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 PSG4Q00888 419 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 GLDNQ6ZMI3 551 aaPredicted RBP15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 SLC35G3Q8N808 338 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 GPX7Q96SL4 187 aaPredicted RBP15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 USB1Q9BQ65 265 aaKnown RBP15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 IGLV1-36A0A0B4J1U3 117 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 PLA2G10O15496 165 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 TNFRSF1AP19438 455 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 ZNF266Q14584 549 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 FAM27BQ5VT28 67 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 ZFP62Q8NB50 900 aaPredicted RBP15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 FREM3P0C091 2139 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 IGHV3-43A0A0B4J1X8 118 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 LMX1BO60663 402 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 TXNDC12O95881 172 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 CYC1P08574 325 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 IGHV3-43DP0DP04 118 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 CALCRP30988 508 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 KLF3P57682 345 aaPredicted RBP15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 ACOT7LQ6ZUV0 252 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 MDP1Q86V88 176 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 TAF9BQ9HBM6 251 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 FAM74A1Q5RGS3 127 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 FBLIM1Q8WUP2 373 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 S1PR3Q99500 378 aa15.76■□□□□ 0.11
PTPDC1-202ENST00000375360 WDR87Q6ZQQ6 2873 aa15.75■□□□□ 0.11
PTPDC1-202ENST00000375360 APOA2P02652 100 aa15.75■□□□□ 0.11
PTPDC1-202ENST00000375360 SSBP1Q04837 148 aaKnown RBP15.75■□□□□ 0.11
PTPDC1-202ENST00000375360 PEA15Q15121 130 aa15.75■□□□□ 0.11
PTPDC1-202ENST00000375360 SKA3Q8IX90 412 aa15.75■□□□□ 0.11
PTPDC1-202ENST00000375360 KCNRGQ8N5I3 272 aa15.75■□□□□ 0.11
PTPDC1-202ENST00000375360 WDSUB1Q8N9V3 476 aa15.75■□□□□ 0.11
PTPDC1-202ENST00000375360 STARD10Q9Y365 291 aa15.75■□□□□ 0.11
PTPDC1-202ENST00000375360 NPIPB9F8W1W9 429 aa15.75■□□□□ 0.11
PTPDC1-202ENST00000375360 SCGB2A1O75556 95 aa15.75■□□□□ 0.11
PTPDC1-202ENST00000375360 RPL12P30050 165 aaKnown RBP15.75■□□□□ 0.11
PTPDC1-202ENST00000375360 RPS16P62249 146 aaKnown RBP15.75■□□□□ 0.11
PTPDC1-202ENST00000375360 BTN1A1Q13410 526 aa15.75■□□□□ 0.11
PTPDC1-202ENST00000375360 RSPO4Q2I0M5 234 aaPredicted RBP15.75■□□□□ 0.11
PTPDC1-202ENST00000375360 PRR7Q8TB68 274 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms