RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 RAE1P78406 368 aaKnown RBP9.11□□□□□ -0.95
PTCH1-204ENST00000375290 FAM109BQ6ICB4 259 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-204ENST00000375290 NRIP2Q9BQI9 281 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 WNK3Q9BYP7 1800 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 ANKRD36A6QL64 1941 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 SLC25A6P12236 298 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 ZNF121P58317 390 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-204ENST00000375290 NUBPLQ8TB37 319 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 ELSPBP1Q96BH3 223 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 SLC2A10O95528 541 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 HEXAP06865 529 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 CD27P26842 260 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 IFI44Q8TCB0 444 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 CCL27Q9Y4X3 112 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 CTXND1A0A1B0GTU2 59 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 SOCS7O14512 581 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 GJB3O75712 270 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 AVPR2P30518 371 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 TAF1P21675 1872 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 WDR38Q5JTN6 314 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 Q6ZN92 141 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 IL22RA2Q969J5 263 aa9.11□□□□□ -0.95
PTCH1-204ENST00000375290 MRPS2Q9Y399 296 aaKnown RBP9.11□□□□□ -0.95
PTCH1-204ENST00000375290 CXorf1O96002 111 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 HIST1H1EP10412 219 aaKnown RBP9.1□□□□□ -0.95
PTCH1-204ENST00000375290 AMTP48728 403 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 PIGTQ969N2 578 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 GPX7Q96SL4 187 aaPredicted RBP9.1□□□□□ -0.95
PTCH1-204ENST00000375290 C19orf24Q9BVV8 132 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 ARL2-SNX15V9GYD0 113 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 PRRC2BQ5JSZ5 2229 aaKnown RBP9.1□□□□□ -0.95
PTCH1-204ENST00000375290 RGPD3A6NKT7 1758 aaPredicted RBP9.1□□□□□ -0.95
PTCH1-204ENST00000375290 RGPD4Q7Z3J3 1758 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 NPIPB9F8W1W9 429 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 OR2A4O95047 310 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 OR2A7Q96R45 310 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 NTF3P20783 257 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 OR4A47Q6IF82 309 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 OR4A4PQ8NGN8 299 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 PRDM7Q9NQW5 492 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 UQCR10Q9UDW1 63 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 LY75O60449 1722 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 NPIPB13A6NJU9 1138 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 NPIPB4C9JG80 1138 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 B4GALT3O60512 393 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 OR6X1Q8NH79 312 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 GOLT1BQ9Y3E0 138 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 DHHO43323 396 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 SEMA7AO75326 666 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 BCL2P10415 239 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 CXCL3P19876 107 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 ZNF117Q03924 483 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 OR1N1Q8NGS0 311 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 COPS9Q8WXC6 57 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 USB1Q9BQ65 265 aaKnown RBP9.1□□□□□ -0.95
PTCH1-204ENST00000375290 H3BQ15 152 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 ACRP10323 421 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 OTX2P32243 289 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 HIST3H3Q16695 136 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 RGS7BPQ6MZT1 257 aaPredicted RBP9.1□□□□□ -0.95
PTCH1-204ENST00000375290 OR5D13Q8NGL4 314 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 STRCP1A6NGW2 1772 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 HIST1H1BP16401 226 aaKnown RBP9.1□□□□□ -0.95
PTCH1-204ENST00000375290 FAAP20Q6NZ36 180 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 OR1F12Q8NHA8 337 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 TMEM70Q9BUB7 260 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 TECRQ9NZ01 308 aaKnown RBP9.1□□□□□ -0.95
PTCH1-204ENST00000375290 THYN1Q9P016 225 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 STARD10Q9Y365 291 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 ISG15P05161 165 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 BMP5P22003 454 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 KIRREL2Q6UWL6 708 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 NFAM1Q8NET5 270 aaPredicted RBP9.1□□□□□ -0.95
PTCH1-204ENST00000375290 OR10G8Q8NGN5 311 aa9.1□□□□□ -0.95
PTCH1-204ENST00000375290 TDRD15B5MCY1 1934 aaKnown RBP9.1□□□□□ -0.95
PTCH1-204ENST00000375290 TM4SF4P48230 202 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 M0R296 226 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 MASP2O00187 686 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 PRR27Q6MZM9 219 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 GINS3Q9BRX5 216 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 SPANXA1Q9NS26 97 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 A0A087WWC5 75 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 ARSAP15289 507 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 LYSMD4Q5XG99 296 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 LRFN3Q9BTN0 628 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 SRYQ05066 204 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 CCSMST1Q4G0I0 132 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 RBM14Q96PK6 669 aaKnown RBP9.09□□□□□ -0.95
PTCH1-204ENST00000375290 NPDC1Q9NQX5 325 aaPredicted RBP9.09□□□□□ -0.95
PTCH1-204ENST00000375290 NTMQ9P121 344 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 PTP4A3O75365 173 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 VENTXO95231 258 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 NGFRP08138 427 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 MPGP29372 298 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 SELENOPP49908 381 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 NKAIN1Q4KMZ8 207 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 HSD17B10Q99714 261 aaKnown RBP9.09□□□□□ -0.95
PTCH1-204ENST00000375290 FFAR4Q5NUL3 377 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 MACROD1Q9BQ69 325 aa9.09□□□□□ -0.95
PTCH1-204ENST00000375290 LRRC3CA6NJW4 275 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms