RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 RBBP9O75884 186 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 IGHV3-13P01766 116 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 MT-ND4P03905 459 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 PPP3CBP16298 524 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 CPT2P23786 658 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 PTAFRP25105 342 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 GCH1P30793 250 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 BSPH1Q075Z2 132 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 MAB21L1Q13394 359 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 TMEM108Q6UXF1 575 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 ZNF573Q86YE8 665 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 C11orf53Q8IXP5 236 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 OSR2Q8N2R0 312 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 NUP37Q8NFH4 326 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 OR10AD1Q8NGE0 317 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 OR8S1Q8NH09 359 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 RNASE6Q93091 150 aaKnown RBP13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 ZNF488Q96MN9 340 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 RTL8AQ9BWD3 113 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 PECRQ9BY49 303 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 PKIBQ9C010 78 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 MSL2Q9HCI7 577 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 TMEM100Q9NV29 134 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 NLKQ9UBE8 527 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 CHD3Q12873 2000 aaKnown RBP13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 ICE1Q9Y2F5 2266 aa13.35□□□□□ -0.27
NIPAL3-204ENST00000374399 GEMIN2O14893 280 aaKnown RBP13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 AKR7A2O43488 359 aa13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 TIMM8AO60220 97 aaPredicted RBP13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 CSTBP04080 98 aaKnown RBP13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 FCER2P06734 321 aa13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 GSTP1P09211 210 aaKnown RBP13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 GABRR1P24046 479 aa13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 BLVRBP30043 206 aaPredicted RBP13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 TFF3Q07654 80 aa13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 IL24Q13007 206 aa13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 ZNF154Q13106 437 aa13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 FAM189A2Q15884 450 aa13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 FAAP20Q6NZ36 180 aa13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 MZT2BQ6NZ67 158 aa13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 SSX8Q7RTT4 187 aa13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 SCCPDHQ8NBX0 429 aa13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 OR4D10Q8NGI6 311 aa13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 MRPS24Q96EL2 167 aaKnown RBP13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 RADILQ96JH8 1075 aa13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 MICU1Q9BPX6 476 aa13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 COQ3Q9NZJ6 369 aa13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 IL36RNQ9UBH0 155 aa13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 ERRFI1Q9UJM3 462 aaPredicted RBP13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 NOP16Q9Y3C1 178 aaKnown RBP13.34□□□□□ -0.27
NIPAL3-204ENST00000374399 LRP5LA4QPB2 252 aa13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 F5H5P2 479 aa13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 J3QT63 122 aa13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 ABCD4O14678 606 aa13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 ECDO95905 644 aaPredicted RBP13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 GNLYP22749 145 aa13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 RBM11P57052 281 aaKnown RBP13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 SSBP1Q04837 148 aaKnown RBP13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 OR8G1Q15617 311 aa13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 PCGF3Q3KNV8 242 aa13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 VHLLQ6RSH7 139 aa13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 C6orf201Q7Z4U5 140 aa13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 MKXQ8IYA7 352 aa13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 GVQW1Q8N7I0 195 aa13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 UPRTQ96BW1 309 aa13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 MRPL37Q9BZE1 423 aaKnown RBP13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 POU2F3Q9UKI9 436 aa13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 ANAPC10Q9UM13 185 aa13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 ST3GAL6Q9Y274 331 aa13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 SPEF1Q9Y4P9 236 aa13.33□□□□□ -0.27
NIPAL3-204ENST00000374399 A0A0B4J293 547 aa13.33□□□□□ -0.28
NIPAL3-204ENST00000374399 IGHV3-64DA0A0J9YX35 117 aa13.33□□□□□ -0.28
NIPAL3-204ENST00000374399 FUOMA2VDF0 154 aa13.33□□□□□ -0.28
NIPAL3-204ENST00000374399 CHATP28329 748 aa13.33□□□□□ -0.28
NIPAL3-204ENST00000374399 FGF12P61328 243 aa13.33□□□□□ -0.28
NIPAL3-204ENST00000374399 PDCD1Q15116 288 aa13.33□□□□□ -0.28
NIPAL3-204ENST00000374399 ST3GAL2Q16842 350 aa13.33□□□□□ -0.28
NIPAL3-204ENST00000374399 NHLRC3Q5JS37 347 aa13.33□□□□□ -0.28
NIPAL3-204ENST00000374399 TRAPPC6BQ86SZ2 158 aa13.33□□□□□ -0.28
NIPAL3-204ENST00000374399 DMRTC2Q8IXT2 367 aaPredicted RBP13.33□□□□□ -0.28
NIPAL3-204ENST00000374399 CADM3Q8N126 398 aa13.33□□□□□ -0.28
NIPAL3-204ENST00000374399 PIAS4Q8N2W9 510 aaPredicted RBP13.33□□□□□ -0.28
NIPAL3-204ENST00000374399 LINC01560Q8TB33 94 aa13.33□□□□□ -0.28
NIPAL3-204ENST00000374399 ENKURQ8TC29 256 aa13.33□□□□□ -0.28
NIPAL3-204ENST00000374399 SYT3Q9BQG1 590 aa13.33□□□□□ -0.28
NIPAL3-204ENST00000374399 C7orf50Q9BRJ6 194 aaKnown RBP13.33□□□□□ -0.28
NIPAL3-204ENST00000374399 DUSP13Q9UII6 198 aa13.33□□□□□ -0.28
NIPAL3-204ENST00000374399 ZFYVE26Q68DK2 2539 aa13.32□□□□□ -0.28
NIPAL3-204ENST00000374399 FAM240BA0A1B0GVZ2 78 aa13.32□□□□□ -0.28
NIPAL3-204ENST00000374399 ZSCAN5BA6NJL1 495 aa13.32□□□□□ -0.28
NIPAL3-204ENST00000374399 ROS1P08922 2347 aa13.32□□□□□ -0.28
NIPAL3-204ENST00000374399 GSTT2BP0CG30 244 aa13.32□□□□□ -0.28
NIPAL3-204ENST00000374399 GIFP27352 417 aa13.32□□□□□ -0.28
NIPAL3-204ENST00000374399 CCR6P51684 374 aa13.32□□□□□ -0.28
NIPAL3-204ENST00000374399 ERVK11-1P61568 191 aa13.32□□□□□ -0.28
NIPAL3-204ENST00000374399 PNLIPRP3Q17RR3 467 aa13.32□□□□□ -0.28
NIPAL3-204ENST00000374399 GALNT11Q8NCW6 608 aa13.32□□□□□ -0.28
NIPAL3-204ENST00000374399 OR4C16Q8NGL9 310 aa13.32□□□□□ -0.28
NIPAL3-204ENST00000374399 PRR7Q8TB68 274 aa13.32□□□□□ -0.28
NIPAL3-204ENST00000374399 BBC3Q96PG8 261 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms