RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 CCL2P13500 99 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 SULT1A1P50225 295 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 FGF8P55075 233 aaPredicted RBP12.79□□□□□ -0.36
TRAF1-201ENST00000373887 RPL24P83731 157 aaKnown RBP12.79□□□□□ -0.36
TRAF1-201ENST00000373887 GUK1Q16774 197 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 FAM27D1Q5T7N8 215 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 CLRN3Q8NCR9 226 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 SLC25A22Q9H936 323 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 CHRNA7P36544 502 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 RPL29P47914 159 aaKnown RBP12.79□□□□□ -0.36
TRAF1-201ENST00000373887 CAMPP49913 170 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 GABARAPL3Q9BY60 117 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 FCN1O00602 326 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 IGHV3-13P01766 116 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 IGHV3-7P01780 117 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 EVX1P49640 407 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 EXTL1Q92935 676 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 POM121Q96HA1 1249 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 GSX1Q9H4S2 264 aaPredicted RBP12.79□□□□□ -0.36
TRAF1-201ENST00000373887 MMP24Q9Y5R2 645 aa12.79□□□□□ -0.36
TRAF1-201ENST00000373887 IGHV3-43A0A0B4J1X8 118 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 IGHV3-43DP0DP04 118 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 ZNF793Q6ZN11 406 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 PCED1AQ9H1Q7 454 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 CD1BP29016 333 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 BMI1P35226 326 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 ZNF788Q6ZQV5 615 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 ADIPOR1Q96A54 375 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 GABRG3Q99928 467 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 ABHD14AQ9BUJ0 271 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 LHX9Q9NQ69 397 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 SNRPGP15A8MWD9 76 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 AREGP15514 252 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 SLC37A1P57057 533 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 ERVS71-1P61550 626 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 TMEM183BQ1AE95 376 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 FNDC7Q5VTL7 733 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 TREM2Q9NZC2 230 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 TMEM30CPA0ZSE6 113 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 HELTA6NFD8 242 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 BTNL3Q6UXE8 466 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 NOXO1Q8NFA2 376 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 ADAM11O75078 769 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 OR2A2Q6IF42 318 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 OR5A2Q8NGI9 324 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 FAM60AQ9NP50 221 aa12.78□□□□□ -0.36
TRAF1-201ENST00000373887 COX7A1P24310 79 aa12.77□□□□□ -0.36
TRAF1-201ENST00000373887 FUT6P51993 359 aa12.77□□□□□ -0.36
TRAF1-201ENST00000373887 SNRPEP62304 92 aaKnown RBP12.77□□□□□ -0.36
TRAF1-201ENST00000373887 FZD5Q13467 585 aa12.77□□□□□ -0.36
TRAF1-201ENST00000373887 C11orf87Q6NUJ2 197 aa12.77□□□□□ -0.36
TRAF1-201ENST00000373887 LYG1Q8N1E2 194 aa12.77□□□□□ -0.36
TRAF1-201ENST00000373887 PPIHO43447 177 aaKnown RBP12.77□□□□□ -0.36
TRAF1-201ENST00000373887 FAM87AP0C7U9 286 aa12.77□□□□□ -0.36
TRAF1-201ENST00000373887 G6PCP35575 357 aa12.77□□□□□ -0.36
TRAF1-201ENST00000373887 LYZP61626 148 aa12.77□□□□□ -0.36
TRAF1-201ENST00000373887 ZNF117Q03924 483 aa12.77□□□□□ -0.36
TRAF1-201ENST00000373887 ZNF141Q15928 474 aa12.77□□□□□ -0.36
TRAF1-201ENST00000373887 MS4A10Q96PG2 267 aa12.77□□□□□ -0.36
TRAF1-201ENST00000373887 RSRP1Q9BUV0 290 aa12.77□□□□□ -0.36
TRAF1-201ENST00000373887 A0A1W2PRD5 423 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 A0A1W2PRF3 423 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 A0A1W2PRM7 423 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 PTHLHP12272 177 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 C21orf62-AS1Q17RA5 79 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 TMEM116Q8NCL8 245 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 GPR137Q96N19 417 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 C19orf43Q9BQ61 176 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 CDCA4Q9BXL8 241 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 PRDM7Q9NQW5 492 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 MCM3APO60318 1980 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 NUP205Q92621 2012 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 LSM11P83369 360 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRAF1-201ENST00000373887 BHLHA9Q7RTU4 235 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 ATG2BQ96BY7 2078 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 ACAA2P42765 397 aaKnown RBP12.77□□□□□ -0.37
TRAF1-201ENST00000373887 MRGPREQ86SM8 312 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 TMEM229BQ8NBD8 167 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 RPEQ96AT9 228 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 PRRX2Q99811 253 aa12.77□□□□□ -0.37
TRAF1-201ENST00000373887 THSD7AQ9UPZ6 1657 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 TOMM34Q15785 309 aaPredicted RBP12.76□□□□□ -0.37
TRAF1-201ENST00000373887 FAM78BQ5VT40 261 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 FDX2Q6P4F2 183 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 UQCC1Q9NVA1 299 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 PSG11Q9UQ72 335 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 MS4A18H0YCH9 400 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 ATXN7O15265 892 aaPredicted RBP12.76□□□□□ -0.37
TRAF1-201ENST00000373887 PRSS1P07477 247 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 SPCS3P61009 180 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 MS4A18Q3C1V0 323 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 DGAT2L7PQ6IED9 249 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 LIMS2Q7Z4I7 341 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 OR2G2Q8NGZ5 317 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 TMEM56Q96MV1 263 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 RHNO1Q9BSD3 238 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 UBR3Q6ZT12 1888 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 USP54Q70EL1 1684 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 M0R2Z0 102 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 ST8SIA5O15466 376 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms