RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 DHFR2Q86XF0 187 aa10.52□□□□□ -0.73
TRAPPC3-201ENST00000373159 OR5M11Q96RB7 305 aa10.52□□□□□ -0.73
TRAPPC3-201ENST00000373159 FAM107BQ9H098 131 aa10.52□□□□□ -0.73
TRAPPC3-201ENST00000373159 MUC13Q9H3R2 512 aa10.52□□□□□ -0.73
TRAPPC3-201ENST00000373159 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRAPPC3-201ENST00000373159 NUFIP1Q9UHK0 495 aaKnown RBP10.52□□□□□ -0.73
TRAPPC3-201ENST00000373159 PQLC2LA1A4F0 135 aa10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 FAM90A22PA8MWA6 464 aa10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 H3BUI4 141 aa10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 DLGAP1O14490 977 aa10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 DHRS3O75911 302 aa10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 IGHV1-8P0DP01 117 aa10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 PIPP12273 146 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 VDAC2P45880 294 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 MNAT1P51948 309 aa10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 OR12D2P58182 307 aa10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 RPS7P62081 194 aaKnown RBP10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 MS4A2Q01362 244 aa10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 TRIM25Q14258 630 aaKnown RBP10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 CLVS2Q5SYC1 327 aa10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 ZNF679Q8IYX0 411 aa10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 ARHGAP24Q8N264 748 aa10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 BBS1Q8NFJ9 593 aa10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 OR5AU1Q8NGC0 362 aa10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 OR14J1Q9UGF5 321 aa10.51□□□□□ -0.73
TRAPPC3-201ENST00000373159 K7EIL1 84 aa10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 PSMD9O00233 223 aa10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 ZNF737O75373 536 aa10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 E2F6O75461 281 aa10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 TTRP02766 147 aa10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 CHRM2P08172 466 aa10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 RAP2AP10114 183 aa10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 OSMP13725 252 aa10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 AZGP1P25311 298 aaKnown RBP10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 COL10A1Q03692 680 aa10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 ZNF829Q3KNS6 432 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 ARSJQ5FYB0 599 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 MINOS1Q5TGZ0 78 aa10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 ASB17Q8WXJ9 295 aa10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 DNAJB9Q9UBS3 223 aa10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 SLC22A13Q9Y226 551 aa10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 TMEM14AQ9Y6G1 99 aa10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 MINOS1-NBL1R4GNA1 71 aa10.5□□□□□ -0.73
TRAPPC3-201ENST00000373159 PRR32B1ATL7 298 aa10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 B2RBV5 119 aa10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 F2RL2O00254 374 aa10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 CST1P01037 141 aa10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 RIDAP52758 137 aaKnown RBP10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 MEF2CQ06413 473 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 IL24Q13007 206 aa10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 DYNC1I2Q13409 638 aaKnown RBP10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 APOFQ13790 326 aa10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 Q6ZSR3 168 aa10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 ASRGL1Q7L266 308 aa10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 TMEM179BQ7Z7N9 219 aa10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 OR14K1Q8NGZ2 314 aa10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 CHID1Q9BWS9 393 aa10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 TEX12Q9BXU0 123 aa10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 PKIBQ9C010 78 aa10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 GPR173Q9NS66 373 aa10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 HILPDAQ9Y5L2 63 aa10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 V9GYS6 101 aa10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 COL7A1Q02388 2944 aa10.49□□□□□ -0.73
TRAPPC3-201ENST00000373159 A0A1B0GTI1 187 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 A0A1W2PRX2 142 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 DHRS7CA6NNS2 312 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 SRSF10O75494 262 aaKnown RBP10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 PF4V1P10720 104 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 JUNBP17275 347 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 EDDM3BP56851 147 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 ACTA2P62736 377 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 ACTG2P63267 376 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 ACTC1P68032 377 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 ACTA1P68133 377 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 SLC35A2P78381 396 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 SLC34A1Q06495 639 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 MFGE8Q08431 387 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 TMEM95Q3KNT9 176 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 TCTEX1D4Q5JR98 221 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 GDPD3Q7L5L3 318 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 C16orf82Q7Z2V1 217 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 PIGWQ7Z7B1 504 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 CENPVQ7Z7K6 275 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 ANGPTL5Q86XS5 388 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 ELMOD2Q8IZ81 293 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 OR8H2Q8N162 312 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 BATF2Q8N1L9 274 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 ASCC1Q8N9N2 400 aaKnown RBP10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 RCC1LQ96I51 464 aaKnown RBP10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 SNX22Q96L94 193 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 ZNF714Q96N38 554 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 ZNF556Q9HAH1 456 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 SEBOXQ9HB31 216 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 SLC25A19Q9HC21 320 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 COPS3Q9UNS2 423 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 ARL2BPQ9Y2Y0 163 aa10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 TSSC4Q9Y5U2 329 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC3-201ENST00000373159 TCRBV4S1A1TA0A5B7 111 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms