RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 METTL9Q9H1A3 318 aa12.19□□□□□ -0.46
LDB3-204ENST00000372066 BANF2Q9H503 90 aa12.19□□□□□ -0.46
LDB3-204ENST00000372066 HEXA-AS1Q9H8Q6 139 aa12.19□□□□□ -0.46
LDB3-204ENST00000372066 PCDHB16Q9NRJ7 776 aa12.19□□□□□ -0.46
LDB3-204ENST00000372066 ZNF835Q9Y2P0 537 aa12.19□□□□□ -0.46
LDB3-204ENST00000372066 APCP25054 2843 aa12.19□□□□□ -0.46
LDB3-204ENST00000372066 hCG_38984A0A1B0GV85 526 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 ANKRD34BA5PLL1 514 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 TUBAL3A6NHL2 446 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 FAM166BA8MTA8 275 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 L7N2F9 121 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 ZNF35P13682 527 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 NFYAP23511 347 aaPredicted RBP12.18□□□□□ -0.46
LDB3-204ENST00000372066 CD34P28906 385 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 TMEM50BP56557 158 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 DHRS2Q13268 280 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 OR8B8Q15620 311 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 SFRP5Q5T4F7 317 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 TSPO2Q5TGU0 170 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 NSUN5P2Q63ZY6 315 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 LIN54Q6MZP7 749 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 PLXDC2Q6UX71 529 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 ASCL4Q6XD76 172 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.18□□□□□ -0.46
LDB3-204ENST00000372066 RNF144BQ7Z419 303 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.18□□□□□ -0.46
LDB3-204ENST00000372066 CD163Q86VB7 1156 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 HOGA1Q86XE5 327 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 SKA3Q8IX90 412 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 GVQW1Q8N7I0 195 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 TMEM178AQ8NBL3 297 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 ZNF680Q8NEM1 530 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 AKR7LQ8NHP1 331 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 ST8SIA4Q92187 359 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 SPSB4Q96A44 273 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 C1QTNF5Q9BXJ0 243 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 PRRG4Q9BZD6 226 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 CHST6Q9GZX3 395 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 SLC6A15Q9H2J7 730 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 GP6Q9HCN6 339 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 IL36GQ9NZH8 169 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 VSIG4Q9Y279 399 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 MEMO1Q9Y316 297 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 TOXO94900 526 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 CLDN14O95500 239 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 HLA-AP01891 365 aaKnown RBP12.18□□□□□ -0.46
LDB3-204ENST00000372066 ZBTB25P24278 435 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 AGTR1P30556 359 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 MTCP1P56278 107 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 NKPD1Q17RQ9 610 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 OR52W1Q6IF63 320 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 ZNF295-AS1Q8N0V1 137 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 OR5M8Q8NGP6 311 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 OR5H2Q8NGV7 314 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 PIGTQ969N2 578 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 FBXW5Q969U6 566 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 MRPS24Q96EL2 167 aaKnown RBP12.18□□□□□ -0.46
LDB3-204ENST00000372066 BORCS8Q96FH0 119 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 ARHGAP5-AS1Q96IT6 56 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 Q96M66 194 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 PECRQ9BY49 303 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 SLC7A11Q9UPY5 501 aa12.18□□□□□ -0.46
LDB3-204ENST00000372066 ZNF816-ZNF321PA0A0X1KG74 233 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 C19orf84I3L1E1 186 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 ZNHIT1O43257 154 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 NRASP01111 189 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 CD8AP01732 235 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 CSN2P05814 226 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 CELA3AP09093 270 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 SERPINA2P20848 420 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 ACKR3P25106 362 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 BLVRBP30043 206 aaPredicted RBP12.17□□□□□ -0.46
LDB3-204ENST00000372066 ECI1P42126 302 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 RBP2P50120 134 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 FUT6P51993 359 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 ATP1B3P54709 279 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 H2BFSP57053 126 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 SEC61A1P61619 476 aaKnown RBP12.17□□□□□ -0.46
LDB3-204ENST00000372066 PPIAP62937 165 aaKnown RBP12.17□□□□□ -0.46
LDB3-204ENST00000372066 HGFACQ04756 655 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 SLC10A1Q14973 349 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 OPCMLQ14982 345 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 CDSNQ15517 529 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 PABPC1L2AQ5JQF8 200 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 COLCA1Q6ZS62 124 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 PXT1Q8NFP0 134 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 TERB2Q8NHR7 220 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 NPRL2Q8WTW4 380 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 MITD1Q8WV92 249 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 APH1AQ96BI3 265 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 ELMOD3Q96FG2 381 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 OPA3Q9H6K4 179 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 GPR173Q9NS66 373 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 SLC7A10Q9NS82 523 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 KCNN3Q9UGI6 736 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 UBQLN2Q9UHD9 624 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 HSF4Q9ULV5 492 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 EDARQ9UNE0 448 aa12.17□□□□□ -0.46
LDB3-204ENST00000372066 NOP16Q9Y3C1 178 aaKnown RBP12.17□□□□□ -0.46
LDB3-204ENST00000372066 OTOGQ6ZRI0 2925 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms