RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 MARCH11A6NNE9 402 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 NPSP0C0P6 89 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 ZNF10P21506 573 aaPredicted RBP10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 CD81P60033 236 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 NKX6-1P78426 367 aaPredicted RBP10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 FZD2Q14332 565 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 ZNF506Q5JVG8 444 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 TMEM183AQ8IXX5 376 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 OR5L2Q8NGL0 311 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 MFSD8Q8NHS3 518 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 FAM210BQ96KR6 192 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 SUSD2Q9UGT4 822 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 NSG1A0A0A6YYJ2 146 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 FAM221AA4D161 298 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 EWSR1Q01844 656 aaKnown RBP eCLIP10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 ANKRD39Q53RE8 183 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 ZNF880Q6PDB4 577 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 C6orf201Q7Z4U5 140 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 OR8B12Q8NGG6 310 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 OR10J5Q8NHC4 309 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 SMDT1Q9H4I9 107 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 RTTNQ86VV8 2226 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 A0A1B0GU03 582 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 DVL1O14640 695 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 SLC31A1O15431 190 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 PLRG1O43660 514 aaKnown RBP10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 CTSDP07339 412 aaPredicted RBP10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 NR2C1P13056 603 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 RRADP55042 308 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 RUNX1Q01196 453 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 COL10A1Q03692 680 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 SGPP2Q8IWX5 399 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 MAML2Q8IZL2 1156 aaPredicted RBP10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 ZNF295-AS1Q8N0V1 137 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 OR5D14Q8NGL3 314 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 OR11L1Q8NGX0 322 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 OR14K1Q8NGZ2 314 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 C11orf40Q8WZ69 217 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 RAB24Q969Q5 203 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 PBDC1Q9BVG4 233 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 HIPK2Q9H2X6 1198 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 SIRT7Q9NRC8 400 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 CENPMQ9NSP4 180 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 PRH1P02810 166 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 PPM1FP49593 454 aaPredicted RBP10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 CEBPGP53567 150 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 CLDN17P56750 224 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 DAZAP2Q15038 168 aaPredicted RBP10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 CNKSR3Q6P9H4 555 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 DEGS2Q6QHC5 323 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 RD3Q7Z3Z2 195 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 METTL27Q8N6F8 245 aaPredicted RBP10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 LRTM2Q8N967 370 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 KIAA1456Q9P272 454 aa10.18□□□□□ -0.78
SMARCA1-201ENST00000371121 TDRD6O60522 2096 aaKnown RBP10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 DOCK8Q8NF50 2099 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 RP1P56715 2156 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 RRP8O43159 456 aaKnown RBP10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 GALR2O43603 387 aaPredicted RBP10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 TDGF1P3P51864 188 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 PIGPP57054 158 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 PRTGQ2VWP7 1150 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 MRPL43Q8N983 215 aaKnown RBP10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 NOXO1Q8NFA2 376 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 BMFQ96LC9 184 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 FAM86C1Q9NVL1 165 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 MTCH2Q9Y6C9 303 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 A6NNC1 897 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 ZNF121P58317 390 aaPredicted RBP10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 GNB2P62879 340 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 RPS21P63220 83 aaKnown RBP10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 HIST2H3PS2Q5TEC6 136 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 SLC35E3Q7Z769 313 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 C9orf40Q8IXQ3 194 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 LIN37Q96GY3 246 aaPredicted RBP10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 THOC3Q96J01 351 aaKnown RBP10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 TBX21Q9UL17 535 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 PADI1Q9ULC6 663 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 MEMO1Q9Y316 297 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 SPACA6W5XKT8 324 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 NBEAQ8NFP9 2946 aa10.17□□□□□ -0.78
SMARCA1-201ENST00000371121 FAM24AA6NFZ4 105 aa10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 SHISA7A6NL88 538 aa10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 SCGNO76038 276 aa10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 HSPB1P04792 205 aaKnown RBP10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 PDLIM4P50479 330 aa10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 COA6Q5JTJ3 125 aaKnown RBP10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 GPR157Q5UAW9 335 aa10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 PSRC1Q6PGN9 363 aaPredicted RBP10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 KCNG3Q8TAE7 436 aa10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 DYRK2Q92630 601 aa10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 TVP23CQ96ET8 276 aa10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 KLHL13Q9P2N7 655 aa10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 SCDO00767 359 aa10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 HCRTR2O43614 444 aa10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 H2BFMP0C1H6 154 aa10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 RAB4AP20338 218 aa10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 RBMXP38159 391 aaKnown RBP10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 ZNF726P1Q15940 193 aa10.16□□□□□ -0.78
SMARCA1-201ENST00000371121 C9orf50Q5SZB4 431 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms