RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ARFGEF3Q5TH69 2177 aa12.87□□□□□ -0.35
LMO4-201ENST00000370542 A0A1B0GTI1 187 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 TMEM82A0PJX8 343 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 GGT3PA6NGU5 568 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 A8MVM7 634 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 PIN1P1O15428 100 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 FGF16O43320 207 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 VAMP5O95183 116 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 IGF2P01344 180 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 ANXA2P07355 339 aaKnown RBP12.86□□□□□ -0.35
LMO4-201ENST00000370542 ZNF83P51522 516 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 HCCSP53701 268 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 DSCR9P59020 149 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 RAB5BP61020 215 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 TGFBR3Q03167 851 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 SPOCK1Q08629 439 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 C11orf87Q6NUJ2 197 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 FAHD2BQ6P2I3 314 aaPredicted RBP12.86□□□□□ -0.35
LMO4-201ENST00000370542 THSD4Q6ZMP0 1018 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 OR2W3Q7Z3T1 314 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.86□□□□□ -0.35
LMO4-201ENST00000370542 LSRQ86X29 649 aaPredicted RBP12.86□□□□□ -0.35
LMO4-201ENST00000370542 MUC15Q8N387 334 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 MAPK1IP1LQ8NDC0 245 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 OR9K2Q8NGE7 335 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 OR5M8Q8NGP6 311 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 PFN4Q8NHR9 129 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 STOML3Q8TAV4 291 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 FAHD2AQ96GK7 314 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 ZNF385AQ96PM9 386 aaKnown RBP12.86□□□□□ -0.35
LMO4-201ENST00000370542 ZNF426Q9BUY5 554 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 SEC11CQ9BY50 192 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 COMMD4Q9H0A8 199 aa12.86□□□□□ -0.35
LMO4-201ENST00000370542 TRBV5-7A0A0A0MS05 114 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 A0A0B4J2E0 115 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 A0A1B0GX12 115 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 A0A1W2PR80 420 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 FTCDNL1E5RQL4 147 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 BLOC1S5-TXNDC5H3BN57 136 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 MAGEB4O15481 346 aaPredicted RBP12.85□□□□□ -0.35
LMO4-201ENST00000370542 GLCEO94923 617 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 AKR7A3O95154 331 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 SIX6O95475 246 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 FCER2P06734 321 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 APEHP13798 732 aaKnown RBP12.85□□□□□ -0.35
LMO4-201ENST00000370542 GTF2F2P13984 249 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 CXCR1P25024 350 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 MPZP25189 248 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 RPL35P42766 123 aaKnown RBP12.85□□□□□ -0.35
LMO4-201ENST00000370542 ALKBH1Q13686 389 aaKnown RBP12.85□□□□□ -0.35
LMO4-201ENST00000370542 MEF2DQ14814 521 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 PNLIPRP3Q17RR3 467 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 SWI5Q1ZZU3 235 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 STEAP1BQ6NZ63 245 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 SLC22A25Q6T423 547 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 ZNF813Q6ZN06 617 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 SSX6Q7RTT6 188 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 SLC16A9Q7RTY1 509 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 LINC00469Q8N7U9 141 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 INO80EQ8NBZ0 244 aaPredicted RBP12.85□□□□□ -0.35
LMO4-201ENST00000370542 OR52E2Q8NGJ4 325 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 THAP6Q8TBB0 222 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 STK35Q8TDR2 534 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 C3orf49Q96BT1 292 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 ADAD1Q96M93 576 aaKnown RBP12.85□□□□□ -0.35
LMO4-201ENST00000370542 GFI1Q99684 422 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 OBP2BQ9NPH6 170 aa12.85□□□□□ -0.35
LMO4-201ENST00000370542 IGHV4-30-2A0A087WSY4 118 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 TRAV14DV4A0A0A6YYC5 116 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 OR5H14A6NHG9 310 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 TMEM212A6NML5 194 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 IFNA2P01563 188 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 OR4E1P0C645 316 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 TPT1P13693 172 aaKnown RBP12.84□□□□□ -0.35
LMO4-201ENST00000370542 PRPS1P60891 318 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 CYCSP99999 105 aaKnown RBP12.84□□□□□ -0.35
LMO4-201ENST00000370542 EGR4Q05215 589 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 LOXL1Q08397 574 aaPredicted RBP12.84□□□□□ -0.35
LMO4-201ENST00000370542 OR7A5Q15622 319 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 HMGN3Q15651 99 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 AWAT2Q6E213 333 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 AAED1Q7RTV5 226 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 LRRTM1Q86UE6 522 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 FBXL14Q8N1E6 418 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 OR52B4Q8NGK2 314 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 OR6S1Q8NH40 331 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 OR5AK2Q8NH90 309 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 GLYATL2Q8WU03 294 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 RNF141Q8WVD5 230 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 ZMYND19Q96E35 227 aaPredicted RBP12.84□□□□□ -0.35
LMO4-201ENST00000370542 VRK1Q99986 396 aaPredicted RBP12.84□□□□□ -0.35
LMO4-201ENST00000370542 ZNF471Q9BX82 626 aaPredicted RBP12.84□□□□□ -0.35
LMO4-201ENST00000370542 NMNAT2Q9BZQ4 307 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 MMP26Q9NRE1 261 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 MYEF2Q9P2K5 600 aaKnown RBP12.84□□□□□ -0.35
LMO4-201ENST00000370542 POMT1Q9Y6A1 747 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 TMEM14AQ9Y6G1 99 aa12.84□□□□□ -0.35
LMO4-201ENST00000370542 A0A1W2PPK0 400 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 METTL21EPA6NDL7 271 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 OR6C68A6NDL8 312 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms