RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 TIMP3P35625 211 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 FOXG1P55316 489 aaPredicted RBP7.52□□□□□ -1.21
TPM3-213ENST00000368545 PITPNAQ00169 270 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 C1orf185Q5T7R7 199 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 FAM166AQ6J272 317 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 PYHIN1Q6K0P9 492 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 RNF144BQ7Z419 303 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 FJX1Q86VR8 437 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 SNX29P2Q8IUI4 249 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 Q8N402 240 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 OR4M1Q8NGD0 313 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 OR5H6Q8NGV6 325 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 C15orf40Q8WUR7 153 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 AKAP1Q92667 903 aaKnown RBP eCLIP7.52□□□□□ -1.218e-7■■■■□ 24.6
TPM3-213ENST00000368545 BCL2L2Q92843 193 aaPredicted RBP7.52□□□□□ -1.21
TPM3-213ENST00000368545 SAT2Q96F10 170 aaPredicted RBP7.52□□□□□ -1.21
TPM3-213ENST00000368545 LYZL4Q96KX0 146 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 SRSF8Q9BRL6 282 aaKnown RBP7.52□□□□□ -1.21
TPM3-213ENST00000368545 C1QTNF5Q9BXJ0 243 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 METTL17Q9H7H0 456 aaPredicted RBP7.52□□□□□ -1.21
TPM3-213ENST00000368545 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.52□□□□□ -1.21
TPM3-213ENST00000368545 OR5V1Q9UGF6 321 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 BSNQ9UPA5 3926 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 OTOGQ6ZRI0 2925 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 MGAQ8IWI9 3026 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 A0A0B4J203 849 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 MAGEB3O15480 346 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 LMX1BO60663 402 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 PTTG1O95997 202 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 HLA-HP01893 362 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 LCATP04180 440 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 IL7P13232 177 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 IGFBP2P18065 325 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 HTR2CP28335 458 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 SCN1BQ07699 218 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 SPOCK1Q08629 439 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 GSG1Q2KHT4 349 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 TRIM16LQ309B1 348 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 SNAI3Q3KNW1 292 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 C1orf100Q5SVJ3 147 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 TRIQKQ629K1 86 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 UTS2BQ765I0 119 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 NAA40Q86UY6 237 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 FAM168AQ92567 244 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 HAVCR1Q96D42 359 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 REEP6Q96HR9 211 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 CHST5Q9GZS9 411 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 PROCRQ9UNN8 238 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 POLQO75417 2590 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 HLA-DQB1P01920 261 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 ALDOBP05062 364 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 SERPINA5P05154 406 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 TMIGD3P0DMS9 266 aaPredicted RBP7.51□□□□□ -1.21
TPM3-213ENST00000368545 PI3P19957 117 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 IGHV1-2P23083 117 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 STOMP27105 288 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 POU3F4P49335 361 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 TDGF1P3P51864 188 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 CLDN12P56749 244 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 OXA1LQ15070 435 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 P2RY14Q15391 338 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 KRBOX4Q5JUW0 171 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 GLYATL3Q5SZD4 288 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 HACD4Q5VWC8 232 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 SHEQ5VZ18 495 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 DCDC5Q6ZRR9 648 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 DTX2Q86UW9 622 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 CENPSQ8N2Z9 138 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 JAGN1Q8N5M9 183 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 CPEB3Q8NE35 698 aaKnown RBP7.51□□□□□ -1.21
TPM3-213ENST00000368545 SEMA6DQ8NFY4 1073 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 OR51A2Q8NGJ7 313 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 OR13C9Q8NGT0 318 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 PTX4Q96A99 478 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 FAM3DQ96BQ1 224 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 SLC25A38Q96DW6 304 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 CPNE2Q96FN4 548 aaPredicted RBP7.51□□□□□ -1.21
TPM3-213ENST00000368545 S100A16Q96FQ6 103 aaKnown RBP7.51□□□□□ -1.21
TPM3-213ENST00000368545 NEK6Q9HC98 313 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 MSL2Q9HCI7 577 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 RHBDL2Q9NX52 303 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 SESN1Q9Y6P5 492 aa7.51□□□□□ -1.21
TPM3-213ENST00000368545 A0A0G2JMP0 313 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 A0A0X1KG70 313 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 CIB4A0PJX0 185 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 BOLA2-SMG1P6H3BVE0 249 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 PRRG2O14669 202 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 CTDSPLO15194 276 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 ZNHIT1O43257 154 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 TNFSF13O75888 250 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 CSF3P09919 207 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 OCMP0CE72 109 aaPredicted RBP7.5□□□□□ -1.21
TPM3-213ENST00000368545 ARSBP15848 533 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 PPP3CBP16298 524 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 CPT2P23786 658 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 APLNRP35414 380 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 ZNF93P35789 620 aaPredicted RBP7.5□□□□□ -1.21
TPM3-213ENST00000368545 MNDAP41218 407 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 MMP15P51511 669 aa7.5□□□□□ -1.21
TPM3-213ENST00000368545 UBE2NP61088 152 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms