RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 C17orf98A8MV24 154 aa12.97□□□□□ -0.33
CKS1B-202ENST00000368436 VGLL3A8MV65 326 aa12.97□□□□□ -0.33
CKS1B-202ENST00000368436 G3V4G9 280 aa12.97□□□□□ -0.33
CKS1B-202ENST00000368436 MAGEB4O15481 346 aaPredicted RBP12.97□□□□□ -0.33
CKS1B-202ENST00000368436 NXPH2O95156 264 aa12.97□□□□□ -0.33
CKS1B-202ENST00000368436 COX7A1P24310 79 aa12.97□□□□□ -0.33
CKS1B-202ENST00000368436 DAPP51397 102 aa12.97□□□□□ -0.33
CKS1B-202ENST00000368436 LGALS4P56470 323 aa12.97□□□□□ -0.33
CKS1B-202ENST00000368436 ACTR3P61158 418 aa12.97□□□□□ -0.33
CKS1B-202ENST00000368436 ERVK11-1P61568 191 aa12.97□□□□□ -0.33
CKS1B-202ENST00000368436 FLOT2Q14254 428 aa12.97□□□□□ -0.33
CKS1B-202ENST00000368436 AADACL4Q5VUY2 407 aa12.97□□□□□ -0.33
CKS1B-202ENST00000368436 HIST2H2BDQ6DRA6 164 aa12.97□□□□□ -0.33
CKS1B-202ENST00000368436 NPFFR1Q9GZQ6 430 aa12.97□□□□□ -0.33
CKS1B-202ENST00000368436 ADGRL4Q9HBW9 690 aa12.97□□□□□ -0.33
CKS1B-202ENST00000368436 OR52A1Q9UKL2 312 aa12.97□□□□□ -0.33
CKS1B-202ENST00000368436 K7N7A8 449 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 CCL1P22362 96 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 CXCR4P61073 352 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 ESRRGP62508 458 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 IL24Q13007 206 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 BCL2L15Q5TBC7 163 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 SAMD5Q5TGI4 173 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 ASRGL1Q7L266 308 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 BCDIN3DQ7Z5W3 292 aaKnown RBP12.96□□□□□ -0.33
CKS1B-202ENST00000368436 LHFPL4Q7Z7J7 247 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 SLC35F2Q8IXU6 374 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 DYNAPQ8N1N2 210 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 C11orf44Q8N8P7 122 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 UTP4Q969X6 686 aaKnown RBP12.96□□□□□ -0.33
CKS1B-202ENST00000368436 CDCA4Q9BXL8 241 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 PKIBQ9C010 78 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 OR14J1Q9UGF5 321 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 MRM2Q9UI43 246 aaKnown RBP12.96□□□□□ -0.33
CKS1B-202ENST00000368436 GTF2A1LQ9UNN4 478 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 POMPQ9Y244 141 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 SNX5Q9Y5X3 404 aa12.96□□□□□ -0.33
CKS1B-202ENST00000368436 A6NIN4 97 aa12.95□□□□□ -0.34
CKS1B-202ENST00000368436 RBP4P02753 201 aa12.95□□□□□ -0.34
CKS1B-202ENST00000368436 VSIG10L2P0DP72 767 aa12.95□□□□□ -0.34
CKS1B-202ENST00000368436 SLX4IPQ5VYV7 408 aa12.95□□□□□ -0.34
CKS1B-202ENST00000368436 NXNL2Q5VZ03 156 aa12.95□□□□□ -0.34
CKS1B-202ENST00000368436 PLEKHG7Q6ZR37 379 aa12.95□□□□□ -0.34
CKS1B-202ENST00000368436 ANGPTL5Q86XS5 388 aa12.95□□□□□ -0.34
CKS1B-202ENST00000368436 BATF2Q8N1L9 274 aa12.95□□□□□ -0.34
CKS1B-202ENST00000368436 Q8N2B8 174 aa12.95□□□□□ -0.34
CKS1B-202ENST00000368436 PRRG3Q9BZD7 231 aa12.95□□□□□ -0.34
CKS1B-202ENST00000368436 ZNF702PQ9H963 129 aa12.95□□□□□ -0.34
CKS1B-202ENST00000368436 SERTAD4Q9NUC0 356 aa12.95□□□□□ -0.34
CKS1B-202ENST00000368436 CLN6Q9NWW5 311 aa12.95□□□□□ -0.34
CKS1B-202ENST00000368436 TBL2Q9Y4P3 447 aaKnown RBP12.95□□□□□ -0.34
CKS1B-202ENST00000368436 ODF3BA8MYP8 253 aa12.94□□□□□ -0.34
CKS1B-202ENST00000368436 ZNF670-ZNF695F2Z2N8 137 aa12.94□□□□□ -0.34
CKS1B-202ENST00000368436 GYG2O15488 501 aa12.94□□□□□ -0.34
CKS1B-202ENST00000368436 ZNF737O75373 536 aa12.94□□□□□ -0.34
CKS1B-202ENST00000368436 PIPP12273 146 aaPredicted RBP12.94□□□□□ -0.34
CKS1B-202ENST00000368436 COL10A1Q03692 680 aa12.94□□□□□ -0.34
CKS1B-202ENST00000368436 DNAL1Q4LDG9 190 aa12.94□□□□□ -0.34
CKS1B-202ENST00000368436 FBLN7Q53RD9 439 aa12.94□□□□□ -0.34
CKS1B-202ENST00000368436 LDLRAD2Q5SZI1 272 aa12.94□□□□□ -0.34
CKS1B-202ENST00000368436 ZNF626Q68DY1 528 aa12.94□□□□□ -0.34
CKS1B-202ENST00000368436 C12orf73Q69YU5 71 aa12.94□□□□□ -0.34
CKS1B-202ENST00000368436 CCBE1Q6UXH8 406 aaPredicted RBP12.94□□□□□ -0.34
CKS1B-202ENST00000368436 ZNF782Q6ZMW2 699 aaPredicted RBP12.94□□□□□ -0.34
CKS1B-202ENST00000368436 TCEANCQ8N8B7 351 aa12.94□□□□□ -0.34
CKS1B-202ENST00000368436 OR11H6Q8NGC7 330 aa12.94□□□□□ -0.34
CKS1B-202ENST00000368436 TMEM163Q8TC26 289 aa12.94□□□□□ -0.34
CKS1B-202ENST00000368436 MALSU1Q96EH3 234 aa12.94□□□□□ -0.34
CKS1B-202ENST00000368436 H2AFY2Q9P0M6 372 aaPredicted RBP12.94□□□□□ -0.34
CKS1B-202ENST00000368436 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.94□□□□□ -0.34
CKS1B-202ENST00000368436 SLC22A13Q9Y226 551 aa12.94□□□□□ -0.34
CKS1B-202ENST00000368436 TCF19Q9Y242 345 aa12.94□□□□□ -0.34
CKS1B-202ENST00000368436 A6NDX4 124 aa12.93□□□□□ -0.34
CKS1B-202ENST00000368436 ZAR1LA6NP61 321 aa12.93□□□□□ -0.34
CKS1B-202ENST00000368436 M0R129 80 aa12.93□□□□□ -0.34
CKS1B-202ENST00000368436 CHRM2P08172 466 aa12.93□□□□□ -0.34
CKS1B-202ENST00000368436 ZNF728P0DKX0 622 aa12.93□□□□□ -0.34
CKS1B-202ENST00000368436 EPHA2P29317 976 aa12.93□□□□□ -0.34
CKS1B-202ENST00000368436 RAB13P51153 203 aa12.93□□□□□ -0.34
CKS1B-202ENST00000368436 OR13D1Q8NGV5 346 aa12.93□□□□□ -0.34
CKS1B-202ENST00000368436 WIPF2Q8TF74 440 aaPredicted RBP12.93□□□□□ -0.34
CKS1B-202ENST00000368436 FOXRED1Q96CU9 486 aaPredicted RBP12.93□□□□□ -0.34
CKS1B-202ENST00000368436 SLC7A6OSQ96CW6 309 aaPredicted RBP12.93□□□□□ -0.34
CKS1B-202ENST00000368436 NKX3-1Q99801 234 aaPredicted RBP12.93□□□□□ -0.34
CKS1B-202ENST00000368436 KRT84Q9NSB2 600 aa12.93□□□□□ -0.34
CKS1B-202ENST00000368436 MTCH1Q9NZJ7 389 aa12.93□□□□□ -0.34
CKS1B-202ENST00000368436 FAM230AA0A1W2PPH8 454 aa12.92□□□□□ -0.34
CKS1B-202ENST00000368436 F8VVB4 439 aa12.92□□□□□ -0.34
CKS1B-202ENST00000368436 F8VWA3 439 aa12.92□□□□□ -0.34
CKS1B-202ENST00000368436 MITFO75030 526 aaPredicted RBP12.92□□□□□ -0.34
CKS1B-202ENST00000368436 ARG1P05089 322 aa12.92□□□□□ -0.34
CKS1B-202ENST00000368436 IGHV1-8P0DP01 117 aa12.92□□□□□ -0.34
CKS1B-202ENST00000368436 DYNLT3P51808 116 aa12.92□□□□□ -0.34
CKS1B-202ENST00000368436 HABP2Q14520 560 aaPredicted RBP12.92□□□□□ -0.34
CKS1B-202ENST00000368436 UBE2V2Q15819 145 aa12.92□□□□□ -0.34
CKS1B-202ENST00000368436 FAM189A2Q15884 450 aa12.92□□□□□ -0.34
CKS1B-202ENST00000368436 SSX6Q7RTT6 188 aa12.92□□□□□ -0.34
CKS1B-202ENST00000368436 CATSPERDQ86XM0 798 aa12.92□□□□□ -0.34
CKS1B-202ENST00000368436 GID4Q8IVV7 300 aa12.92□□□□□ -0.34
CKS1B-202ENST00000368436 OR8H2Q8N162 312 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms