RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 TMEM80Q96HE8 168 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 COMMD4Q9H0A8 199 aa12.13□□□□□ -0.47
SF3B5-201ENST00000367569 EXOSC1Q9Y3B2 195 aaKnown RBP12.13□□□□□ -0.47
SF3B5-201ENST00000367569 PPIAL4CA0A0B4J2A2 164 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 MDFIC2A0A1B0GVS7 189 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 TMEM89A2RUT3 159 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 TRIM77I1YAP6 450 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 NDUFB3O43676 98 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 ANGPTL7O43827 346 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 ATP6V1G2O95670 118 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 ISG15P05161 165 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 OCM2P0CE71 109 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 OCMP0CE72 109 aaPredicted RBP12.12□□□□□ -0.47
SF3B5-201ENST00000367569 NDUFB7P17568 137 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 ATF1P18846 271 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 C21orf33P30042 268 aaPredicted RBP12.12□□□□□ -0.47
SF3B5-201ENST00000367569 CFHR2P36980 270 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 COMPP49747 757 aaPredicted RBP12.12□□□□□ -0.47
SF3B5-201ENST00000367569 CAPZA1P52907 286 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 SMIM21Q3B7S5 101 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 BRD3OSQ6XYD6 125 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 SLC36A1Q7Z2H8 476 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 CD177Q8N6Q3 437 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 ZNRF1Q8ND25 227 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 ZNF671Q8TAW3 534 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 NANPQ8TBE9 248 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 FBLIM1Q8WUP2 373 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 JAM3Q9BX67 310 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 ONECUT1Q9UBC0 465 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 ZNF69Q9UC07 566 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 ZNF222Q9UK12 451 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 DHDHQ9UQ10 334 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 MGAM2Q2M2H8 2515 aa12.12□□□□□ -0.47
SF3B5-201ENST00000367569 IRGMA1A4Y4 181 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 RFPL4AA6NLU0 287 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 TMEM212A6NML5 194 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 RFPL4AL1F8VTS6 287 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 CCDC159P0C7I6 412 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 BCL3P20749 454 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 IL13RA1P78552 427 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 PAX8Q06710 450 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 TMPRSS11AQ6ZMR5 421 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 ZNF788Q6ZQV5 615 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 STX19Q8N4C7 294 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 BPIFB2Q8N4F0 458 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 PP6455Q8WZ26 134 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 GCDHQ92947 438 aaPredicted RBP12.11□□□□□ -0.47
SF3B5-201ENST00000367569 C12orf43Q96C57 262 aaKnown RBP12.11□□□□□ -0.47
SF3B5-201ENST00000367569 OPALINQ96PE5 141 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 DUX5Q96PT3 197 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 NRIP2Q9BQI9 281 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 NEK6Q9HC98 313 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 ESM1Q9NQ30 184 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 RBFOX1Q9NWB1 397 aaKnown RBP12.11□□□□□ -0.47
SF3B5-201ENST00000367569 PAK1IP1Q9NWT1 392 aaPredicted RBP12.11□□□□□ -0.47
SF3B5-201ENST00000367569 TAS2R4Q9NYW5 299 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 MTCH1Q9NZJ7 389 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 SLC25A10Q9UBX3 287 aaPredicted RBP12.11□□□□□ -0.47
SF3B5-201ENST00000367569 PSORS1C1Q9UIG5 152 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 POLDIP2Q9Y2S7 368 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 CAB39Q9Y376 341 aaPredicted RBP12.11□□□□□ -0.47
SF3B5-201ENST00000367569 MAB21L2Q9Y586 359 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 PCDHGB5Q9Y5G0 923 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 HSPE1-MOB4S4R3N1 261 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 TRRAPQ9Y4A5 3859 aa12.11□□□□□ -0.47
SF3B5-201ENST00000367569 KIR2DS1A0A191URI9 304 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 EFCAB10A6NFE3 127 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 SLC1A7O00341 560 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 NDUFA2O43678 99 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 SERPINA3P01011 423 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 HCKP08631 526 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 PIPP12273 146 aaPredicted RBP12.1□□□□□ -0.47
SF3B5-201ENST00000367569 MPZP25189 248 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 NPBWR2P48146 333 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 TGM4P49221 684 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 NPY4RP50391 375 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 FUT6P51993 359 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 MTCP1P56278 107 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 ARF6P62330 175 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 LRRC10Q5BKY1 277 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 ASPHD2Q6ICH7 369 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 ZDHHC22Q8N966 263 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 OR51A2Q8NGJ7 313 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 EMG1Q92979 244 aaKnown RBP12.1□□□□□ -0.47
SF3B5-201ENST00000367569 CEP19Q96LK0 163 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 JMJD8Q96S16 334 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 TBX15Q96SF7 602 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 SUCNR1Q9BXA5 334 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 SIRT7Q9NRC8 400 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 CHCHD3Q9NX63 227 aaKnown RBP12.1□□□□□ -0.47
SF3B5-201ENST00000367569 KAAG1Q9UBP8 84 aa12.1□□□□□ -0.47
SF3B5-201ENST00000367569 RPUSD1Q9UJJ7 312 aaKnown RBP12.1□□□□□ -0.47
SF3B5-201ENST00000367569 A0A1W2PQ09 198 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 A0A1W2PRD5 423 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 A0A1W2PRF3 423 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 A0A1W2PRM7 423 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 PTGES3LE9PB15 166 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 MYL12BO14950 172 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 SIGLEC5O15389 551 aa12.09□□□□□ -0.47
SF3B5-201ENST00000367569 RPSAP08865 295 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms