RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 MTCP1P56278 107 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 MESP2Q0VG99 397 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 TMEM128Q5BJH2 165 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 NUDCD2Q8WVJ2 157 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 C11orf40Q8WZ69 217 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 PSMF1Q92530 271 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 RAB18Q9NP72 206 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 TMEM272A0A1B0GTI8 110 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 C2orf72A6NCS6 295 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 MFSD2BA6NFX1 497 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 SEMA7AO75326 666 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 DBHP09172 617 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 SLC36A2Q495M3 483 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 RNASEKQ6P5S7 137 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 LINC00114Q6XXX2 140 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 LRP11Q86VZ4 500 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 DMBX1Q8NFW5 382 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 OR5L1Q8NGL2 311 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 SPSB1Q96BD6 273 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 NUDT22Q9BRQ3 303 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 NLRC5Q86WI3 1866 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 DOCK4Q8N1I0 1966 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 IGHV1OR21-1A0A087WYE8 117 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 FIGNL2A6NMB9 653 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 CD200P41217 278 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 GAS1P54826 345 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 NXPH1P58417 271 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 ARL16Q0P5N6 197 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 EIF3IQ13347 325 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 TMPPEQ6ZT21 453 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 SLC16A14Q7RTX9 510 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 ZAR1Q86SH2 424 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 NRTNQ99748 197 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 NRSN2Q9GZP1 204 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 CHST6Q9GZX3 395 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 ZMAT3Q9HA38 289 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 FLVCR1Q9Y5Y0 555 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 FITM1A5D6W6 292 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 A6NLC8 198 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 SSSCA1O60232 199 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 DXOO77932 396 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 ARG1P05089 322 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 CTXN2P0C2S0 81 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 PPOXP50336 477 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 CATR1Q13166 79 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 SHISA6Q6ZSJ9 500 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 MOB3CQ70IA8 216 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 THNSL2Q86YJ6 484 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 OR4A16Q8NH70 328 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 ISOC2Q96AB3 205 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 MS4A3Q96HJ5 214 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 MCTS1Q9ULC4 181 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 CENPVL1A0A0U1RR11 272 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 THY1P04216 161 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 GP1BAP07359 652 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 HOXB1P14653 301 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 FPR2P25090 351 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 ROM1Q03395 351 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 OR8G2PQ6IF36 304 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 DHRS13Q6UX07 377 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 AAED1Q7RTV5 226 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 ZNF573Q86YE8 665 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 TGIF2LXQ8IUE1 241 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 RBMXL3Q8N7X1 1067 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 SMIM12Q96EX1 92 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 RAB9BQ9NP90 201 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 PTPRDP23468 1912 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 A6NDN8 102 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 ANKRD30BLA7E2S9 258 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 LINC01387J3KSC0 135 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 ACTL6BO94805 426 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 IGKV1D-16P01601 117 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 ERVS71-1P61550 626 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 UBE2G1P62253 170 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 POLR2GP62487 172 aaKnown RBP eCLIP4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 MAJINQ3KP22 176 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 TEX30Q5JUR7 227 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 MRPL21Q7Z2W9 205 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 ASB10Q8WXI3 467 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 KISS1RQ969F8 398 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 WFIKKN1Q96NZ8 548 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 MOGAT1Q96PD6 335 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 RCL1Q9Y2P8 373 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 TRPM7Q96QT4 1865 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 HEATR5AQ86XA9 2040 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 B4E171 279 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 XRCC2O43543 280 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 ADAM11O75078 769 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 YIF1AO95070 293 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 SLC25A4P12235 298 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 HTR5AP47898 357 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 MNX1P50219 401 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 LGALSLQ3ZCW2 172 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 RHBDD2Q6NTF9 364 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 PLXDC2Q6UX71 529 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 OR51E1Q8TCB6 317 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 FBXO17Q96EF6 278 aa4.78□□□□□ -1.64
CDC42BPA-204ENST00000366767 ZNF426Q9BUY5 554 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms