RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 H0YL77 283 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 CYTIPO60759 359 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 DANCRP0C864 163 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 HSD11B2P80365 405 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 UBE2V2Q15819 145 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 DPPA2Q7Z7J5 298 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 COMMD1Q8N668 190 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 OR1N1Q8NGS0 311 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 KCNG3Q8TAE7 436 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 ZNF2Q9BSG1 426 aaPredicted RBP17.26■□□□□ 0.35
TRIM58-201ENST00000366481 UNKLQ9H9P5 680 aaKnown RBP17.26■□□□□ 0.35
TRIM58-201ENST00000366481 FGF21Q9NSA1 209 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 HDGFL3Q9Y3E1 203 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 CCDC163A0A0D9SF12 145 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 TCAPO15273 167 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 DXOO77932 396 aaKnown RBP17.26■□□□□ 0.35
TRIM58-201ENST00000366481 SOD3P08294 240 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 CXCL1P09341 107 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 ABCA11PQ4W5N1 156 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 GRINAQ7Z429 371 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 TGIF2LXQ8IUE1 241 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 SLC38A9Q8NBW4 561 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 EMG1Q92979 244 aaKnown RBP17.26■□□□□ 0.35
TRIM58-201ENST00000366481 MISP3Q96FF7 219 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 DEDDO75618 318 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 GAPDHP04406 335 aaKnown RBP17.26■□□□□ 0.35
TRIM58-201ENST00000366481 TAS2R60P59551 318 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 PKIAP61925 76 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 NHLH2Q02577 135 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 Q8WTZ3 238 aa17.26■□□□□ 0.35
TRIM58-201ENST00000366481 OR5H15A6NDH6 313 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 OR5H1A6NKK0 313 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 HIST1H2BKO60814 126 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 HIST1H2BJP06899 126 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 MDKP21741 143 aaPredicted RBP17.25■□□□□ 0.35
TRIM58-201ENST00000366481 HIST1H2BOP23527 126 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 HIST1H2BBP33778 126 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 PTGER4P35408 488 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 HIST1H2BDP58876 126 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 HIST1H2BCP62807 126 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 FOXF1Q12946 379 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 HIST2H2BEQ16778 126 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.25■□□□□ 0.35
TRIM58-201ENST00000366481 HIST1H2BHQ93079 126 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 MALSU1Q96EH3 234 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 HIST1H2BNQ99877 126 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 HIST1H2BMQ99879 126 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 PBOV1Q9GZY1 135 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 RFNGQ9Y644 331 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 A0A0A6YYD4 124 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 NPIPB7O75200 414 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 GSTP1P09211 210 aaKnown RBP17.25■□□□□ 0.35
TRIM58-201ENST00000366481 LYL1P12980 280 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 VAX1Q5SQQ9 334 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 FIGNL2A6NMB9 653 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 SFTPDP35247 375 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 C21orf62-AS1Q17RA5 79 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 C11orf40Q8WZ69 217 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 CPNE4Q96A23 557 aaPredicted RBP17.25■□□□□ 0.35
TRIM58-201ENST00000366481 GPR27Q9NS67 375 aa17.25■□□□□ 0.35
TRIM58-201ENST00000366481 VSX1Q9NZR4 365 aaPredicted RBP17.25■□□□□ 0.35
TRIM58-201ENST00000366481 CDC14BO60729 498 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 PRSS12P56730 875 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 RNF4P78317 190 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 DLK1P80370 383 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 TSPO2Q5TGU0 170 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 CDCP2Q5VXM1 449 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 NUP54Q7Z3B4 507 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 CPEB2Q7Z5Q1 589 aaKnown RBP17.24■□□□□ 0.35
TRIM58-201ENST00000366481 NTNG2Q96CW9 530 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 KLRF1Q9NZS2 232 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 KCNIP3Q9Y2W7 256 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 MMACHCQ9Y4U1 282 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 GVINP1Q7Z2Y8 2422 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 IGHV1OR21-1A0A087WYE8 117 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 MT-ATP6P00846 226 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 TMEM50BP56557 158 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 TAS2R46P59540 309 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 AADACL3Q5VUY0 350 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 ZNF574Q6ZN55 896 aaPredicted RBP17.24■□□□□ 0.35
TRIM58-201ENST00000366481 C17orf78Q8N4C9 275 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 TMEM156Q8N614 296 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 OR2G3Q8NGZ4 309 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 SLAMF6Q96DU3 332 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 OR10A2Q9H208 303 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 PLEKHA2Q9HB19 425 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 PISDQ9UG56 409 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 RALGAPA1Q6GYQ0 2036 aa17.24■□□□□ 0.35
TRIM58-201ENST00000366481 LOC390937A0A1W2PQ73 354 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 BLACEA4D250 179 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 LILRA5A6NI73 299 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 TNRC18O15417 2968 aaPredicted RBP17.23■□□□□ 0.35
TRIM58-201ENST00000366481 IFNA10P01566 189 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 TTRP02766 147 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 HSF1Q00613 529 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 ZNF385CQ66K41 422 aaPredicted RBP17.23■□□□□ 0.35
TRIM58-201ENST00000366481 DNM1P34Q6PK57 102 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 ZNF429Q86V71 674 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 STT3BQ8TCJ2 826 aa17.23■□□□□ 0.35
TRIM58-201ENST00000366481 SNX22Q96L94 193 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms