RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 PPOXP50336 477 aa17.47■□□□□ 0.39
SHISA4-201ENST00000362011 PCGF3Q3KNV8 242 aa17.47■□□□□ 0.39
SHISA4-201ENST00000362011 SLC22A6Q4U2R8 563 aa17.47■□□□□ 0.39
SHISA4-201ENST00000362011 DTX2Q86UW9 622 aa17.47■□□□□ 0.39
SHISA4-201ENST00000362011 TMEM200AQ86VY9 491 aa17.47■□□□□ 0.39
SHISA4-201ENST00000362011 OR10K1Q8NGX5 313 aa17.47■□□□□ 0.39
SHISA4-201ENST00000362011 KCNG3Q8TAE7 436 aa17.47■□□□□ 0.39
SHISA4-201ENST00000362011 SLAMF9Q96A28 289 aa17.47■□□□□ 0.39
SHISA4-201ENST00000362011 WDFY2Q96P53 400 aa17.47■□□□□ 0.39
SHISA4-201ENST00000362011 TSC22D3Q99576 134 aa17.47■□□□□ 0.39
SHISA4-201ENST00000362011 CST11Q9H112 138 aa17.47■□□□□ 0.39
SHISA4-201ENST00000362011 PCDHB16Q9NRJ7 776 aa17.47■□□□□ 0.39
SHISA4-201ENST00000362011 IL36GQ9NZH8 169 aa17.47■□□□□ 0.39
SHISA4-201ENST00000362011 FBLN5Q9UBX5 448 aa17.47■□□□□ 0.39
SHISA4-201ENST00000362011 IGKV1-12A0A0C4DH73 117 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 IGHV3-64DA0A0J9YX35 117 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 TMEM14DPA8MWL7 114 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 FAM25AB3EWG3 89 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 FAM25CB3EWG5 89 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 FAM25GB3EWG6 89 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 TRAPPC2LH3BP13 241 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 TPD52L2O43399 206 aaKnown RBP17.46■□□□□ 0.38
SHISA4-201ENST00000362011 ZNF780AO75290 641 aaPredicted RBP17.46■□□□□ 0.38
SHISA4-201ENST00000362011 HTR3BO95264 441 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 IGKV1D-12P01611 117 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 APOA1P02647 267 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 CSTBP04080 98 aaKnown RBP17.46■□□□□ 0.38
SHISA4-201ENST00000362011 DANCRP0C864 163 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 RAB6AP20340 208 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 QRFPP83859 136 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 OR10K2Q6IF99 312 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 C11orf71Q6IPW1 123 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 LRRC28Q86X40 367 aaPredicted RBP17.46■□□□□ 0.38
SHISA4-201ENST00000362011 PTX4Q96A99 478 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 SLC25A38Q96DW6 304 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 FOXC2Q99958 501 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 EGLN1Q9GZT9 426 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 FN3KRPQ9HA64 309 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 UFSP2Q9NUQ7 469 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 RHBDL2Q9NX52 303 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 RAB22AQ9UL26 194 aa17.46■□□□□ 0.38
SHISA4-201ENST00000362011 CDIPTO14735 213 aa17.45■□□□□ 0.38
SHISA4-201ENST00000362011 CRTAPO75718 401 aaPredicted RBP17.45■□□□□ 0.38
SHISA4-201ENST00000362011 KDM4BO94953 1096 aa17.45■□□□□ 0.38
SHISA4-201ENST00000362011 MPIG6BO95866 241 aa17.45■□□□□ 0.38
SHISA4-201ENST00000362011 EIF4EP06730 217 aaKnown RBP17.45■□□□□ 0.38
SHISA4-201ENST00000362011 CD99P14209 185 aa17.45■□□□□ 0.38
SHISA4-201ENST00000362011 TNFRSF1AP19438 455 aa17.45■□□□□ 0.38
SHISA4-201ENST00000362011 TNFSF8P32971 234 aa17.45■□□□□ 0.38
SHISA4-201ENST00000362011 GATA4P43694 442 aa17.45■□□□□ 0.38
SHISA4-201ENST00000362011 PLA2G7Q13093 441 aa17.45■□□□□ 0.38
SHISA4-201ENST00000362011 UNC119Q13432 240 aa17.45■□□□□ 0.38
SHISA4-201ENST00000362011 LSAMPQ13449 338 aa17.45■□□□□ 0.38
SHISA4-201ENST00000362011 MPPED2Q15777 294 aa17.45■□□□□ 0.38
SHISA4-201ENST00000362011 C11orf53Q8IXP5 236 aa17.45■□□□□ 0.38
SHISA4-201ENST00000362011 ZCCHC24Q8N2G6 241 aaKnown RBP17.45■□□□□ 0.38
SHISA4-201ENST00000362011 RAB40AQ8WXH6 277 aa17.45■□□□□ 0.38
SHISA4-201ENST00000362011 NINJ1Q92982 152 aa17.45■□□□□ 0.38
SHISA4-201ENST00000362011 TRAF4Q9BUZ4 470 aaPredicted RBP17.45■□□□□ 0.38
SHISA4-201ENST00000362011 CLEC4MQ9H2X3 399 aaPredicted RBP17.45■□□□□ 0.38
SHISA4-201ENST00000362011 DECR2Q9NUI1 292 aa17.45■□□□□ 0.38
SHISA4-201ENST00000362011 CDC14BO60729 498 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 RHBDL1O75783 438 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 CD8AP01732 235 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 SOD3P08294 240 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 BMP4P12644 408 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 ELK1P19419 428 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 BCL3P20749 454 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 CCL8P80075 99 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 SPRNQ5BIV9 151 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 MOGAT3Q86VF5 341 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 ERGIC1Q969X5 290 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 FAM46BQ96A09 425 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 TMEM59Q9BXS4 323 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 ABCG5Q9H222 651 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 BANF2Q9H503 90 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 RHOFQ9HBH0 211 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 C1orf123Q9NWV4 160 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 MTCH1Q9NZJ7 389 aa17.44■□□□□ 0.38
SHISA4-201ENST00000362011 A0A1W2PP11 408 aa17.43■□□□□ 0.38
SHISA4-201ENST00000362011 hCG_1807616A0A1W2PRN6 198 aa17.43■□□□□ 0.38
SHISA4-201ENST00000362011 ACAA1P09110 424 aaPredicted RBP17.43■□□□□ 0.38
SHISA4-201ENST00000362011 MGMTP16455 207 aa17.43■□□□□ 0.38
SHISA4-201ENST00000362011 NPBWR2P48146 333 aa17.43■□□□□ 0.38
SHISA4-201ENST00000362011 EFNB2P52799 333 aa17.43■□□□□ 0.38
SHISA4-201ENST00000362011 FAM189A2Q15884 450 aa17.43■□□□□ 0.38
SHISA4-201ENST00000362011 WDR82Q6UXN9 313 aa17.43■□□□□ 0.38
SHISA4-201ENST00000362011 ZNF826PQ6ZT77 177 aa17.43■□□□□ 0.38
SHISA4-201ENST00000362011 TGIF2LYQ8IUE0 185 aa17.43■□□□□ 0.38
SHISA4-201ENST00000362011 Q8IYB0 196 aa17.43■□□□□ 0.38
SHISA4-201ENST00000362011 CMTM4Q8IZR5 234 aa17.43■□□□□ 0.38
SHISA4-201ENST00000362011 POC1AQ8NBT0 407 aa17.43■□□□□ 0.38
SHISA4-201ENST00000362011 TMEM104Q8NE00 496 aa17.43■□□□□ 0.38
SHISA4-201ENST00000362011 OR10Z1Q8NGY1 313 aa17.43■□□□□ 0.38
SHISA4-201ENST00000362011 NRGNQ92686 78 aa17.43■□□□□ 0.38
SHISA4-201ENST00000362011 DIRAS2Q96HU8 199 aa17.43■□□□□ 0.38
SHISA4-201ENST00000362011 VRK1Q99986 396 aaPredicted RBP17.43■□□□□ 0.38
SHISA4-201ENST00000362011 URM1Q9BTM9 101 aaKnown RBP17.43■□□□□ 0.38
SHISA4-201ENST00000362011 SAP30LQ9HAJ7 183 aa17.43■□□□□ 0.38
SHISA4-201ENST00000362011 SFTPBP07988 381 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms