RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 DYNC2LI1Q8TCX1 351 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 SSC4DQ8WTU2 575 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 GUCD1Q96NT3 240 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 PIMREGQ9BSJ6 248 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 BTAF1O14981 1849 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 NPFFO15130 113 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 RPS27P42677 84 aaKnown RBP8.75□□□□□ -1.01
CHD3-202ENST00000358181 RTN4RL1Q86UN2 441 aaPredicted RBP8.75□□□□□ -1.01
CHD3-202ENST00000358181 NKAIN3Q8N8D7 197 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 TECRQ9NZ01 308 aaKnown RBP8.75□□□□□ -1.01
CHD3-202ENST00000358181 ZMIZ1Q9ULJ6 1067 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 MYH14Q7Z406 1995 aaKnown RBP8.75□□□□□ -1.01
CHD3-202ENST00000358181 KLF7O75840 302 aaPredicted RBP8.75□□□□□ -1.01
CHD3-202ENST00000358181 RPL29P47914 159 aaKnown RBP8.75□□□□□ -1.01
CHD3-202ENST00000358181 KIAA1024LP59773 190 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 TIAL1Q01085 375 aaKnown RBP eCLIP8.75□□□□□ -1.01
CHD3-202ENST00000358181 TFF2Q03403 129 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 BCL7AQ4VC05 210 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 IGSF11Q5DX21 431 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 C16orf82Q7Z2V1 217 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 PERPQ96FX8 193 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 OR10C1Q96KK4 312 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 EIF4E2O60573 245 aaKnown RBP8.75□□□□□ -1.01
CHD3-202ENST00000358181 LMX1BO60663 402 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 MALP21145 153 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 MARC2Q969Z3 335 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 OXGR1Q96P68 337 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 PBOV1Q9GZY1 135 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 SHROOM3Q8TF72 1996 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 PROB1E7EW31 1015 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 KLKB1P03952 638 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 HRH1P35367 487 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 TMEM215Q68D42 235 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 OR52N4Q8NGI2 321 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 OR4C16Q8NGL9 310 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 ITLN2Q8WWU7 325 aaPredicted RBP8.75□□□□□ -1.01
CHD3-202ENST00000358181 SAP30LQ9HAJ7 183 aa8.75□□□□□ -1.01
CHD3-202ENST00000358181 LPAR6P43657 344 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 WNT3P56703 355 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 RNF212Q495C1 297 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 ZNF324BQ6AW86 544 aaPredicted RBP8.74□□□□□ -1.01
CHD3-202ENST00000358181 STAC2Q6ZMT1 411 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 ARRDC2Q8TBH0 407 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 KCNK17Q96T54 332 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 ING1Q9UK53 422 aaPredicted RBP8.74□□□□□ -1.01
CHD3-202ENST00000358181 HRASP01112 189 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 HIST1H1EP10412 219 aaKnown RBP8.74□□□□□ -1.01
CHD3-202ENST00000358181 NUBP1P53384 320 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 SPCS2Q15005 226 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 CD226Q15762 336 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 RSPO2Q6UXX9 243 aaPredicted RBP8.74□□□□□ -1.01
CHD3-202ENST00000358181 MOGAT3Q86VF5 341 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 OR10J6PQ8NGY7 276 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 SORT1Q99523 831 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 REPIN1Q9BWE0 567 aaKnown RBP8.74□□□□□ -1.01
CHD3-202ENST00000358181 ALX4Q9H161 411 aaPredicted RBP8.74□□□□□ -1.01
CHD3-202ENST00000358181 SLC25A19Q9HC21 320 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 SPAARA0A1B0GVQ0 90 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 C7orf72A4D263 438 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 PDZK1IP1Q13113 114 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 COX20Q5RI15 118 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 SLC16A12Q6ZSM3 486 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 OR2L13Q8N349 312 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 Q8WTZ3 238 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 GABARAPL3Q9BY60 117 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 SOX21Q9Y651 276 aaPredicted RBP8.74□□□□□ -1.01
CHD3-202ENST00000358181 FCN1O00602 326 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 TMEM183BQ1AE95 376 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 GUSBP11Q6P575 273 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 TMEM37Q8WXS4 190 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 MAP1LC3CQ9BXW4 147 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 NDUFB11Q9NX14 153 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 GDF2Q9UK05 429 aaPredicted RBP8.74□□□□□ -1.01
CHD3-202ENST00000358181 PRRC2BQ5JSZ5 2229 aaKnown RBP8.74□□□□□ -1.01
CHD3-202ENST00000358181 CD80P33681 288 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 RFX2P48378 723 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 FOXO1Q12778 655 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 FAM219AQ8IW50 185 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 UBALD2Q8IYN6 164 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 SPPL3Q8TCT6 385 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 TMEM18Q96B42 140 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 ELOVL1Q9BW60 279 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 INSIG2Q9Y5U4 225 aa8.74□□□□□ -1.01
CHD3-202ENST00000358181 A0A1B0GU03 582 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 OR2A25A4D2G3 310 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 MFNGO00587 321 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 RGS13O14921 159 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 PTTG1O95997 202 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 VSIG10L2P0DP72 767 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 CLDN10P78369 228 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 SLC17A1Q14916 467 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 TTC9CQ8N5M4 171 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 DDX60Q8IY21 1712 aaKnown RBP8.73□□□□□ -1.01
CHD3-202ENST00000358181 TRAV8-7A0A075B6U6 113 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 hADV38S2A0JD32 116 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 SLC35E2P0CK97 266 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 NRN1LQ496H8 165 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 STARD4Q96DR4 205 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 NKX6-2Q9C056 277 aaPredicted RBP8.73□□□□□ -1.01
CHD3-202ENST00000358181 TOMM7Q9P0U1 55 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms