RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 OR4D6Q8NGJ1 314 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 OR10Z1Q8NGY1 313 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 OR51F2Q8NH61 342 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 ZNF671Q8TAW3 534 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 FAM168AQ92567 244 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 FOXC2Q99958 501 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 BPESC1Q9GZL8 116 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 SVEP1Q4LDE5 3571 aa12.49□□□□□ -0.41
CCNE1-202ENST00000357943 IGHV4-30-2A0A087WSY4 118 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.48□□□□□ -0.41
CCNE1-202ENST00000357943 IFNL4K9M1U5 179 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 CDRT1O95170 752 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 CLEC2LP0C7M8 214 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 CD37P11049 281 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 CD80P33681 288 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 ART1P52961 327 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 CAV3P56539 151 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 AVPI1Q5T686 147 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 MKXQ8IYA7 352 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 POC1AQ8NBT0 407 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 C10orf105Q8TEF2 133 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 UQCC2Q9BRT2 126 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 DCUN1D5Q9BTE7 237 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 SMURF1Q9HCE7 757 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 WIPI2Q9Y4P8 454 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 NPTNQ9Y639 398 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 V9GY05 133 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 TANC2Q9HCD6 1990 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 PDCD5O14737 125 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 NOS1APO75052 506 aaPredicted RBP12.48□□□□□ -0.41
CCNE1-202ENST00000357943 SFTPBP07988 381 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 BCL3P20749 454 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 GLRA1P23415 457 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 GIFP27352 417 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 GPR6P46095 362 aaPredicted RBP12.48□□□□□ -0.41
CCNE1-202ENST00000357943 ERVK11-1P61568 191 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 C1orf100Q5SVJ3 147 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 TPRA1Q86W33 373 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 ZSCAN4Q8NAM6 433 aaPredicted RBP12.48□□□□□ -0.41
CCNE1-202ENST00000357943 NDNFQ8TB73 568 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 FOXRED1Q96CU9 486 aaPredicted RBP12.48□□□□□ -0.41
CCNE1-202ENST00000357943 CEP19Q96LK0 163 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 NRIP2Q9BQI9 281 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 RBFOX1Q9NWB1 397 aaKnown RBP12.48□□□□□ -0.41
CCNE1-202ENST00000357943 ITGB1BP2Q9UKP3 347 aa12.48□□□□□ -0.41
CCNE1-202ENST00000357943 CELSR1Q9NYQ6 3014 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 PPIAL4EA0A075B759 164 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 IGHV3OR15-7A0A075B7D8 119 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 A0A0G2JK05 382 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 PPIAL4DF5H284 164 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 CYB5AP00167 134 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 ACAA1P09110 424 aaPredicted RBP12.47□□□□□ -0.41
CCNE1-202ENST00000357943 CSF3P09919 207 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 PPIAL4FP0DN26 164 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 CALCBP10092 127 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 ZNF182P17025 639 aaPredicted RBP12.47□□□□□ -0.41
CCNE1-202ENST00000357943 RPS19P39019 145 aaKnown RBP12.47□□□□□ -0.41
CCNE1-202ENST00000357943 BTG1P62324 171 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 ZMYND11Q15326 602 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 AWAT2Q6E213 333 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 GLIPR1L1Q6UWM5 242 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 PRSS57Q6UWY2 283 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 PEG10Q86TG7 708 aaKnown RBP12.47□□□□□ -0.41
CCNE1-202ENST00000357943 SAXO1Q8IYX7 474 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 DEFB108BQ8NET1 73 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 PXT1Q8NFP0 134 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 OR10K1Q8NGX5 313 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 PIMREGQ9BSJ6 248 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 ELL3Q9HB65 397 aaPredicted RBP12.47□□□□□ -0.41
CCNE1-202ENST00000357943 PLGRKTQ9HBL7 147 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 ING4Q9UNL4 249 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 MRPS28Q9Y2Q9 187 aaKnown RBP12.47□□□□□ -0.41
CCNE1-202ENST00000357943 PPIAL4AQ9Y536 164 aa12.47□□□□□ -0.41
CCNE1-202ENST00000357943 PRRC2AP48634 2157 aaKnown RBP12.46□□□□□ -0.41
CCNE1-202ENST00000357943 OTOGQ6ZRI0 2925 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 A0A1W2PP11 408 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 OOEPA6NGQ2 149 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 TRAPPC2LH3BP13 241 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 NDUFS8O00217 210 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 SLC17A2O00624 439 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 KDM4BO94953 1096 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 NXPH2O95156 264 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 IGHV2-70P01814 119 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 HTR2CP28335 458 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 SERPINB10P48595 397 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 PSMD7P51665 324 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 CLDN12P56749 244 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 DSCR9P59020 149 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 LSAMPQ13449 338 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 HES5Q5TA89 166 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 SHEQ5VZ18 495 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 FAM166AQ6J272 317 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 ASCL4Q6XD76 172 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 WFDC11Q8NEX6 87 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 RAB1CQ92928 201 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 SLC25A28Q96A46 364 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 C1orf147Q96MC9 270 aaPredicted RBP12.46□□□□□ -0.41
CCNE1-202ENST00000357943 TMEM165Q9HC07 324 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 HES4Q9HCC6 221 aa12.46□□□□□ -0.41
CCNE1-202ENST00000357943 ISPDA4D126 451 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms