RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 PUS1Q9Y606 427 aaKnown RBP eCLIP7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 C2orf16Q68DN1 1984 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 A0A0A6YYD4 124 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 ALG1L2C9J202 215 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 C5orf67F2Z3F1 127 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 K7EPK0 472 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 RER1O15258 196 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 TCF21O43680 179 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 SFT2D2O95562 160 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 DIRAS3O95661 229 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 BPNT1O95861 308 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 DDAH2O95865 285 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 PRH1P02810 166 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 IFI6P09912 130 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 CFPP27918 469 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 CAPZBP47756 277 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 SLC6A9P48067 706 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 RBX1P62877 108 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 HSF1Q00613 529 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 PRSS54Q6PEW0 395 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 FAM71E2Q8N5Q1 922 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 SEMA6DQ8NFY4 1073 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 OR2AJ1Q8NGZ0 328 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 KLHDC7BQ96G42 594 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 TPSD1Q9BZJ3 242 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 ACTR3CQ9C0K3 210 aaPredicted RBP7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 WWTR1Q9GZV5 400 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 SLC25A31Q9H0C2 315 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 LPAR5Q9H1C0 372 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 GAL3ST2Q9H3Q3 398 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 GPR84Q9NQS5 396 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 URGCP-MRPS24S4R325 110 aa7.26□□□□□ -1.25
CDC42SE1-201ENST00000357235 TMEM238LA0A1B0GVL6 79 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 CDRT15L2A8MXV6 281 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 MS4A18H0YCH9 400 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 CYB5BO43169 146 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 ISG15P05161 165 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 TRGC1P0CF51 173 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 HIST1H1DP16402 221 aaKnown RBP7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 RBMXP38159 391 aaKnown RBP7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 MS4A18Q3C1V0 323 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 CHRFAM7AQ494W8 412 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 FAHD2BQ6P2I3 314 aaPredicted RBP7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 FAM57BQ71RH2 274 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 GKN2Q86XP6 184 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 DTWD2Q8NBA8 298 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 DAZLQ92904 295 aaKnown RBP7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 TOMM40LQ969M1 308 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 FAM122AQ96E09 287 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 FAHD2AQ96GK7 314 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 ADGRG7Q96K78 797 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 JSRP1Q96MG2 331 aaPredicted RBP7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 LANCL2Q9NS86 450 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 ZNF107Q9UII5 783 aaPredicted RBP7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 GPR132Q9UNW8 380 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 STARD10Q9Y365 291 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 TRBV6-7A0A0A0MS04 114 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 A0A1W2PPQ1 181 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 A8MXE2 369 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 RRP8O43159 456 aaKnown RBP7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 DFFBO76075 338 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 IL18BPO95998 194 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 IGHV4-34P06331 123 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 PET100P0DJ07 73 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 RAC2P15153 192 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 ANOS1P23352 680 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 BLVRBP30043 206 aaPredicted RBP7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 FHITP49789 147 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 DAP3P51398 398 aaKnown RBP7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 MMP16P51512 607 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 PRSS12P56730 875 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 CLRN1P58418 232 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 SUPT4H1P63272 117 aaKnown RBP7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 MFAP5Q13361 173 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 SP6Q3SY56 376 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 CDCP2Q5VXM1 449 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 DEGS2Q6QHC5 323 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 H1FNTQ75WM6 255 aaPredicted RBP7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 OR13D1Q8NGV5 346 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 Q8WTZ3 238 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 SLC35B3Q9H1N7 401 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 FAM206AQ9NX38 181 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 FBXO7Q9Y3I1 522 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 CHTOPQ9Y3Y2 248 aaKnown RBP7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 CELSR3Q9NYQ7 3312 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 A6NIZ1 184 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 F5H5K5 113 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 SIAH2O43255 324 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 CDC14BO60729 498 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 SRSF10O75494 262 aaKnown RBP7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 C1QL1O75973 258 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 CSTBP04080 98 aaKnown RBP7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 IGKV3-11P04433 115 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 CXCL1P09341 107 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 OR13C7P0DN81 318 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 MYF5P13349 255 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 GABRR1P24046 479 aa7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 RPL12P30050 165 aaKnown RBP7.25□□□□□ -1.25
CDC42SE1-201ENST00000357235 FCGR2CP31995 323 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms