RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 PDZK1IP1Q13113 114 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 UNC119Q13432 240 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 MADCAM1Q13477 382 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 ZMYND11Q15326 602 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 HSD17B12Q53GQ0 312 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 HES5Q5TA89 166 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 JAGN1Q8N5M9 183 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 CSNK2A3Q8NEV1 391 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 OR5H6Q8NGV6 325 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 PP6455Q8WZ26 134 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 FAM46BQ96A09 425 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 PHF21AQ96BD5 680 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 C12orf43Q96C57 262 aaKnown RBP3.38□□□□□ -1.87
LIG4-201ENST00000356922 GAL3ST1Q99999 423 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 MICU1Q9BPX6 476 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 TLNRD1Q9H1K6 362 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 PLGRKTQ9HBL7 147 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 TUBG2Q9NRH3 451 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 ELF5Q9UKW6 265 aaPredicted RBP3.38□□□□□ -1.87
LIG4-201ENST00000356922 GSTK1Q9Y2Q3 226 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 MPC1Q9Y5U8 109 aa3.38□□□□□ -1.87
LIG4-201ENST00000356922 DOCK11Q5JSL3 2073 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 A0A0A6YYD4 124 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 IGHV1-69-2A0A0G2JMI3 117 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 CD55P08174 381 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 ZNF182P17025 639 aaPredicted RBP3.37□□□□□ -1.87
LIG4-201ENST00000356922 RAB3AP20336 220 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 BCL3P20749 454 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 ZNF93P35789 620 aaPredicted RBP3.37□□□□□ -1.87
LIG4-201ENST00000356922 CD200P41217 278 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 PTGFRP43088 359 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 PPOXP50336 477 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 SNU13P55769 128 aaKnown RBP3.37□□□□□ -1.87
LIG4-201ENST00000356922 ERVFRD-1P60508 538 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 ERVK11-1P61568 191 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 QRFPP83859 136 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 MZT1Q08AG7 82 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 P2RY14Q15391 338 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 DEFB113Q30KQ7 82 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 PIGYQ3MUY2 71 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 GPR141Q7Z602 305 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 ZNF554Q86TJ5 538 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 FAM90A1Q86YD7 464 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 C1orf174Q8IYL3 243 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 OR51D1Q8NGF3 324 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 OR51F2Q8NH61 342 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 BORCS8Q96FH0 119 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 BPESC1Q9GZL8 116 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 BANF2Q9H503 90 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 TMEM138Q9NPI0 162 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 ZDHHC8Q9ULC8 765 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 FN1P02751 2386 aaKnown RBP3.37□□□□□ -1.87
LIG4-201ENST00000356922 TENM1Q9UKZ4 2725 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 A0A096LNT2 108 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 TMEM178BH3BS89 294 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 TNFRSF13BO14836 293 aaPredicted RBP3.37□□□□□ -1.87
LIG4-201ENST00000356922 GATBO75879 557 aaKnown RBP3.37□□□□□ -1.87
LIG4-201ENST00000356922 RAF1P04049 648 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 SNRPBP14678 240 aaKnown RBP3.37□□□□□ -1.87
LIG4-201ENST00000356922 ZNF12P17014 697 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 FSTP19883 344 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 MYL9P24844 172 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 MPZP25189 248 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 BDKRB2P30411 391 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 CD80P33681 288 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 GATA4P43694 442 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 RBP2P50120 134 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 FUT6P51993 359 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 EFNA4P52798 201 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 CAPZA1P52907 286 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 GNG3P63215 75 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 SCN1BQ07699 218 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 DDI2Q5TDH0 399 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 C20orf204Q6ZNR8 217 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 CD177Q8N6Q3 437 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 PNLDC1Q8NA58 520 aaKnown RBP3.37□□□□□ -1.87
LIG4-201ENST00000356922 NEK7Q8TDX7 302 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 TIMD4Q96H15 378 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 NICN1Q9BSH3 213 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 TMUB1Q9BVT8 246 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 CXXC4Q9H2H0 198 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 ING3Q9NXR8 418 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 DNAJB11Q9UBS4 358 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 SSR3Q9UNL2 185 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 NOP16Q9Y3C1 178 aaKnown RBP3.37□□□□□ -1.87
LIG4-201ENST00000356922 NAV3Q8IVL0 2385 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 CR1P17927 2039 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 IGKV1D-17A0A075B6S4 117 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 LRRC30A6NM36 301 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 PPIHO43447 177 aaKnown RBP3.37□□□□□ -1.87
LIG4-201ENST00000356922 CSTBP04080 98 aaKnown RBP3.37□□□□□ -1.87
LIG4-201ENST00000356922 VSIG8P0DPA2 414 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 PTHLHP12272 177 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 TNFRSF1AP19438 455 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 MAPK3P27361 379 aaPredicted RBP3.37□□□□□ -1.87
LIG4-201ENST00000356922 HTR2CP28335 458 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 DLX1P56177 255 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 HFEQ30201 348 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 C2orf76Q3KRA6 126 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 MOGAT2Q3SYC2 334 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms