RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 TOLLIPQ9H0E2 274 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 ZNF160Q9HCG1 818 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 ANAPC10Q9UM13 185 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 PIGLQ9Y2B2 252 aa8.87□□□□□ -0.99
PTPRA-203ENST00000356147 PGA4P0DJD7 388 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 PGA3P0DJD8 388 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 APOBEC1P41238 236 aaKnown RBP8.86□□□□□ -0.99
PTPRA-203ENST00000356147 DCAF7P61962 342 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 PRAMEF20Q5VT98 475 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 KIAA0895LQ68EN5 471 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 FBXW12Q6X9E4 464 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 SPNS3Q6ZMD2 512 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 TMEM217Q8N7C4 229 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 UBAC2Q8NBM4 344 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 DDIT4LQ96D03 193 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 PNRC2Q9NPJ4 139 aaKnown RBP8.86□□□□□ -0.99
PTPRA-203ENST00000356147 FAM86C1Q9NVL1 165 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 CCDC187A0A096LP49 1063 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 IGHG1P01857 330 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 CXCL1P09341 107 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 RNF224P0DH78 156 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 SPINK2P20155 84 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 GALNSP34059 522 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 RGS19P49795 217 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 TLE1Q04724 770 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 TMEM176BQ3YBM2 270 aaPredicted RBP8.86□□□□□ -0.99
PTPRA-203ENST00000356147 HIST2H3AQ71DI3 136 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 SUMF2Q8NBJ7 301 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 NOXO1Q8NFA2 376 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 OR10D4PQ8NGN7 298 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 OR1J1Q8NGS3 322 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 SLC35B3Q9H1N7 401 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 NELFAQ9H3P2 528 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 WNT16Q9UBV4 365 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 ZNF407Q9C0G0 2248 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 DMDP11532 3685 aa8.86□□□□□ -0.99
PTPRA-203ENST00000356147 CRYM-AS1A6NIL9 109 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 RHPN2P1A8MT19 583 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 CSNK1EP49674 416 aaKnown RBP8.85□□□□□ -0.99
PTPRA-203ENST00000356147 BLKP51451 505 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 CLDN17P56750 224 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 RUNX1Q01196 453 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 CFHR1Q03591 330 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 OR10G3Q8NGC4 313 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 PRO1933Q9H354 126 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 DOK5Q9P104 306 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 PPP4R1LQ9P1A2 415 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 FBLN5Q9UBX5 448 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 AK3Q9UIJ7 227 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 LIPGQ9Y5X9 500 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 ADAMTS9Q9P2N4 1935 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 TGIF2-C20orf24A0A0A6YYL0 155 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 BORCS7-ASMTA0A0B4J1R7 106 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 CXorf65A6NEN9 183 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 ANKUB1A6NFN9 424 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 H3BMH7 237 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 PHF1O43189 567 aaPredicted RBP8.85□□□□□ -0.99
PTPRA-203ENST00000356147 TRAF3IP2O43734 574 aaPredicted RBP8.85□□□□□ -0.99
PTPRA-203ENST00000356147 CST7O76096 145 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 GAPDHP04406 335 aaKnown RBP8.85□□□□□ -0.99
PTPRA-203ENST00000356147 PRF1P14222 555 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 ZNF43P17038 809 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 MTCP1P56278 107 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 C17orf67Q0P5P2 114 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 HYAL1Q12794 435 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 ZP4Q12836 540 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 PHYHD1Q5SRE7 291 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 THEM4Q5T1C6 240 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 FAM180AQ6UWF9 173 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 UNQ6494/PRO21346Q6UXR6 183 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 DOK3Q7L591 496 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 FAM89BQ8N5H3 189 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 LYPD6BQ8NI32 183 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 TMPRSS5Q9H3S3 457 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 ANXA10Q9UJ72 324 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 HDGFL3Q9Y3E1 203 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 FAM186AA6NE01 2351 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 ZNF726A6NNF4 738 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 E5RGE8 158 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 G3V3Y1 287 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 PATE4P0C8F1 98 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 ZNF728P0DKX0 622 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 FOSL2P15408 326 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 TAGLN2P37802 199 aaKnown RBP8.85□□□□□ -0.99
PTPRA-203ENST00000356147 PLA2G5P39877 138 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 FASLGP48023 281 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 ZNF84P51523 738 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 ZNF41P51814 821 aaPredicted RBP8.85□□□□□ -0.99
PTPRA-203ENST00000356147 TSC22D1Q15714 1073 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 SNAI3Q3KNW1 292 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 PIGYQ3MUY2 71 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 COL13A1Q5TAT6 717 aaPredicted RBP8.85□□□□□ -0.99
PTPRA-203ENST00000356147 NSUN5P2Q63ZY6 315 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 ZNF441Q8N8Z8 693 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 SLC38A9Q8NBW4 561 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 ZNF784Q8NCA9 323 aaPredicted RBP8.85□□□□□ -0.99
PTPRA-203ENST00000356147 POC1BQ8TC44 478 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 RAB39BQ96DA2 213 aa8.85□□□□□ -0.99
PTPRA-203ENST00000356147 ZNF837Q96EG3 531 aaPredicted RBP8.85□□□□□ -0.99
PTPRA-203ENST00000356147 TAAR9Q96RI9 348 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms