RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 PTGER4P35408 488 aa13.83□□□□□ -0.19
RTN3-205ENST00000356000 ERVS71-1P61550 626 aa13.83□□□□□ -0.19
RTN3-205ENST00000356000 MPV17LQ2QL34 196 aa13.83□□□□□ -0.19
RTN3-205ENST00000356000 Q6ZVL8 140 aa13.83□□□□□ -0.19
RTN3-205ENST00000356000 EMG1Q92979 244 aaKnown RBP13.83□□□□□ -0.19
RTN3-205ENST00000356000 SCARF2Q96GP6 870 aaPredicted RBP13.83□□□□□ -0.19
RTN3-205ENST00000356000 SLC25A44Q96H78 314 aaPredicted RBP13.83□□□□□ -0.19
RTN3-205ENST00000356000 NUDT16L1Q9BRJ7 211 aaKnown RBP13.83□□□□□ -0.19
RTN3-205ENST00000356000 SF3B5Q9BWJ5 86 aaKnown RBP13.83□□□□□ -0.19
RTN3-205ENST00000356000 OR10A5Q9H207 317 aa13.83□□□□□ -0.19
RTN3-205ENST00000356000 C6orf106Q9H6K1 298 aaPredicted RBP13.83□□□□□ -0.19
RTN3-205ENST00000356000 ARID1AO14497 2285 aa13.83□□□□□ -0.2
RTN3-205ENST00000356000 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.83□□□□□ -0.2
RTN3-205ENST00000356000 TUBG1P23258 451 aa13.83□□□□□ -0.2
RTN3-205ENST00000356000 CSNK1A1P48729 337 aa13.83□□□□□ -0.2
RTN3-205ENST00000356000 ZNF92Q03936 586 aa13.83□□□□□ -0.2
RTN3-205ENST00000356000 UNC119Q13432 240 aa13.83□□□□□ -0.2
RTN3-205ENST00000356000 GPR18Q14330 331 aa13.83□□□□□ -0.2
RTN3-205ENST00000356000 NUP54Q7Z3B4 507 aa13.83□□□□□ -0.2
RTN3-205ENST00000356000 OR56B2PQ8NGI1 322 aa13.83□□□□□ -0.2
RTN3-205ENST00000356000 OR6N2Q8NGY6 317 aa13.83□□□□□ -0.2
RTN3-205ENST00000356000 MRPL24Q96A35 216 aaKnown RBP13.83□□□□□ -0.2
RTN3-205ENST00000356000 GABRG3Q99928 467 aa13.83□□□□□ -0.2
RTN3-205ENST00000356000 TBL1XR1Q9BZK7 514 aa13.83□□□□□ -0.2
RTN3-205ENST00000356000 SLC45A2Q9UMX9 530 aa13.83□□□□□ -0.2
RTN3-205ENST00000356000 PTPRSQ13332 1948 aa13.83□□□□□ -0.2
RTN3-205ENST00000356000 NSG1A0A0A6YYJ2 146 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 IGHV2OR16-5A0A0B4J2B6 119 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 FAM221AA4D161 298 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 MAP1LC3B2A6NCE7 125 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 C5orf67F2Z3F1 127 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 RPS20P60866 119 aaKnown RBP13.82□□□□□ -0.2
RTN3-205ENST00000356000 UBE2NP61088 152 aaKnown RBP13.82□□□□□ -0.2
RTN3-205ENST00000356000 LINC00114Q6XXX2 140 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 C16orf82Q7Z2V1 217 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 DPY19L4Q7Z388 723 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 MRGPRX1Q96LB2 322 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 MAP1LC3BQ9GZQ8 125 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 PLK3Q9H4B4 646 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 LYRM2Q9NU23 88 aaPredicted RBP13.82□□□□□ -0.2
RTN3-205ENST00000356000 MRPL22Q9NWU5 206 aaKnown RBP13.82□□□□□ -0.2
RTN3-205ENST00000356000 PLAGL1Q9UM63 463 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 ST3GAL6Q9Y274 331 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 B3GALT5Q9Y2C3 310 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 TMEM14AQ9Y6G1 99 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 NPIPA5A0A0B4J1W7 369 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 PRR33A8MZF0 331 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 NPIPA7E9PJI5 369 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 HBE1P02100 147 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 NPIPA8P0DM63 369 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 EPHA8P29322 1005 aaPredicted RBP13.82□□□□□ -0.2
RTN3-205ENST00000356000 CFAP161Q6P656 301 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 SLC24A5Q71RS6 500 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 CENPVQ7Z7K6 275 aaPredicted RBP13.82□□□□□ -0.2
RTN3-205ENST00000356000 RTN4RL2Q86UN3 420 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 IL22RA2Q969J5 263 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 RPUSD4Q96CM3 377 aaKnown RBP13.82□□□□□ -0.2
RTN3-205ENST00000356000 SMIM12Q96EX1 92 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 CST9LQ9H4G1 147 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 CALHM2Q9HA72 323 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 SLC2A9Q9NRM0 540 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 OR6C3Q9NZP0 311 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 LAMTOR2Q9Y2Q5 125 aa13.82□□□□□ -0.2
RTN3-205ENST00000356000 TRAV30A0A087WSZ9 112 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 CTSVO60911 334 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 MMP23AO75900 390 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 CTSBP07858 339 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 CT45A8P0DMV1 189 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 CT45A9P0DMV2 189 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 RPS27P42677 84 aaKnown RBP13.81□□□□□ -0.2
RTN3-205ENST00000356000 QRFPP83859 136 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 CT45A2Q5DJT8 189 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 PTCRAQ6ISU1 281 aaPredicted RBP13.81□□□□□ -0.2
RTN3-205ENST00000356000 TMEM256Q8N2U0 113 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 D2HGDHQ8N465 521 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 PPP1R14AQ96A00 147 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 RASL10BQ96S79 203 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 GPX7Q96SL4 187 aaPredicted RBP13.81□□□□□ -0.2
RTN3-205ENST00000356000 AMELYQ99218 206 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 UBE2ZQ9H832 354 aaPredicted RBP13.81□□□□□ -0.2
RTN3-205ENST00000356000 ELOVL3Q9HB03 270 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 Q9N2K0 584 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 TMEM9BQ9NQ34 198 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 RBM7Q9Y580 266 aaKnown RBP13.81□□□□□ -0.2
RTN3-205ENST00000356000 LINC01553A4QN01 128 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 NUPR1O60356 82 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 SNRPD1P62314 119 aaKnown RBP13.81□□□□□ -0.2
RTN3-205ENST00000356000 MFGE8Q08431 387 aaPredicted RBP13.81□□□□□ -0.2
RTN3-205ENST00000356000 MRPL49Q13405 166 aaKnown RBP13.81□□□□□ -0.2
RTN3-205ENST00000356000 LRRC69Q6ZNQ3 347 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 CISD2Q8N5K1 135 aaKnown RBP13.81□□□□□ -0.2
RTN3-205ENST00000356000 OR5H2Q8NGV7 314 aa13.81□□□□□ -0.2
RTN3-205ENST00000356000 ZNF430Q9H8G1 570 aaPredicted RBP13.81□□□□□ -0.2
RTN3-205ENST00000356000 XRCC2O43543 280 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 CLEC3AO75596 197 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 TYMSP04818 313 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 ACAA2P42765 397 aaKnown RBP13.8□□□□□ -0.2
RTN3-205ENST00000356000 GALR1P47211 349 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 ZNF266Q14584 549 aa13.8□□□□□ -0.2
RTN3-205ENST00000356000 IL13RA2Q14627 380 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms