RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 OR3A4PP47883 348 aa14.95□□□□□ -0.02
PDLIM7-202ENST00000355841 NPBWR2P48146 333 aa14.95□□□□□ -0.02
PDLIM7-202ENST00000355841 ZP1P60852 638 aa14.95□□□□□ -0.02
PDLIM7-202ENST00000355841 MICBQ29980 383 aa14.95□□□□□ -0.02
PDLIM7-202ENST00000355841 C1QL2Q7Z5L3 287 aa14.95□□□□□ -0.02
PDLIM7-202ENST00000355841 POC1AQ8NBT0 407 aa14.95□□□□□ -0.02
PDLIM7-202ENST00000355841 OR51F2Q8NH61 342 aa14.95□□□□□ -0.02
PDLIM7-202ENST00000355841 THRSPQ92748 146 aa14.95□□□□□ -0.02
PDLIM7-202ENST00000355841 NRIP2Q9BQI9 281 aa14.95□□□□□ -0.02
PDLIM7-202ENST00000355841 ZNF665Q9H7R5 613 aa14.95□□□□□ -0.02
PDLIM7-202ENST00000355841 TCF7L1Q9HCS4 588 aa14.95□□□□□ -0.02
PDLIM7-202ENST00000355841 TRAV38-1A0A0B4J264 116 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 A0A1B0GW55 424 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 NXPH2O95156 264 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 IGHV2-5P01817 119 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 INHBBP09529 407 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 DUX4L2P0CJ85 424 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 DUX4L3P0CJ86 424 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 DUX4L4P0CJ87 422 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 DUX4L5P0CJ88 424 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 DUX4L6P0CJ89 424 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 DUX4L7P0CJ90 424 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 TMEM225BP0DP42 221 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 CD36P16671 472 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 SRMP19623 302 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 BCL3P20749 454 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 ZNF93P35789 620 aaPredicted RBP14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 SEC61A1P61619 476 aaKnown RBP14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 TMEM249Q2WGJ8 235 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 TMEM155Q4W5P6 130 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 TEX36Q5VZQ5 186 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 CD200R1LQ6Q8B3 271 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 DUX4L9Q6RFH8 374 aaPredicted RBP14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 LRRTM1Q86UE6 522 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 MUC20Q8N307 709 aaPredicted RBP14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 SPICQ8N5J4 248 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 JAGN1Q8N5M9 183 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 TMIGD2Q96BF3 282 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 CEP19Q96LK0 163 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 OR51E2Q9H255 320 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 LPAR2Q9HBW0 351 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 EXOSC4Q9NPD3 245 aaKnown RBP14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 RBFOX1Q9NWB1 397 aaKnown RBP14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 DUX4Q9UBX2 424 aa14.94□□□□□ -0.02
PDLIM7-202ENST00000355841 FAM157AC9JC47 383 aa14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 ALDOBP05062 364 aa14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 C11orf91Q3C1V1 193 aa14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 C22orf42Q6IC83 251 aa14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 ACP7Q6ZNF0 438 aa14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 TNFAIP8L1Q8WVP5 186 aa14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 IL36RNQ9UBH0 155 aa14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 F8P00451 2351 aa14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 TRDV1A0A1B0GX56 115 aa14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 NOS1APO75052 506 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 CDRT1O95170 752 aa14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 MUC1P15941 1255 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 JUNBP17275 347 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 GADD45AP24522 165 aa14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 ERVK11-1P61568 191 aa14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 MKXQ8IYA7 352 aa14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 DGCR14Q96DF8 476 aaKnown RBP14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 CCL13Q99616 98 aa14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 PATZ1Q9HBE1 687 aaKnown RBP14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 SMURF1Q9HCE7 757 aa14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 NLKQ9UBE8 527 aa14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 STUB1Q9UNE7 303 aa14.93□□□□□ -0.02
PDLIM7-202ENST00000355841 CSPG4Q6UVK1 2322 aa14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 SHISA3A0PJX4 238 aa14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 OR2AT4A6NND4 320 aa14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 TRAPPC2LH3BP13 241 aa14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 CYB5AP00167 134 aa14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 SFTPBP07988 381 aa14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 IGHV4-31P0DP07 118 aa14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 RPS2P15880 293 aaKnown RBP14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 AMY2BP19961 511 aa14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 PTGFRP43088 359 aa14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 CEBPDP49716 269 aaPredicted RBP14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 SNU13P55769 128 aaKnown RBP14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 DCDC5Q6ZRR9 648 aa14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 OR10K1Q8NGX5 313 aa14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 CHCHD6Q9BRQ6 235 aa14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 CNTD2Q9H8S5 307 aa14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 ELL3Q9HB65 397 aaPredicted RBP14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 HES4Q9HCC6 221 aa14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 PTTG2Q9NZH5 202 aa14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 CTSZQ9UBR2 303 aa14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 SVEP1Q4LDE5 3571 aa14.92□□□□□ -0.02
PDLIM7-202ENST00000355841 IGKV1D-17A0A075B6S4 117 aa14.91□□□□□ -0.02
PDLIM7-202ENST00000355841 LOC100506127A0A0U1RQW1 187 aa14.91□□□□□ -0.02
PDLIM7-202ENST00000355841 RFPL4AA6NLU0 287 aa14.91□□□□□ -0.02
PDLIM7-202ENST00000355841 RFPL4AL1F8VTS6 287 aa14.91□□□□□ -0.02
PDLIM7-202ENST00000355841 TNFRSF13BO14836 293 aaPredicted RBP14.91□□□□□ -0.02
PDLIM7-202ENST00000355841 TMPRSS2O15393 492 aa14.91□□□□□ -0.02
PDLIM7-202ENST00000355841 PHF1O43189 567 aaPredicted RBP14.91□□□□□ -0.02
PDLIM7-202ENST00000355841 ADAM20O43506 726 aa14.91□□□□□ -0.02
PDLIM7-202ENST00000355841 ARL6IP5O75915 188 aa14.91□□□□□ -0.02
PDLIM7-202ENST00000355841 FSTL3O95633 263 aa14.91□□□□□ -0.02
PDLIM7-202ENST00000355841 WNT2P09544 360 aa14.91□□□□□ -0.02
PDLIM7-202ENST00000355841 PSG2P11465 335 aa14.91□□□□□ -0.02
PDLIM7-202ENST00000355841 LSAMPQ13449 338 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms