RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 RNF224P0DH78 156 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 B3GNTL1Q67FW5 361 aaPredicted RBP13.28□□□□□ -0.28
LMX1B-201ENST00000355497 RSPO2Q6UXX9 243 aaPredicted RBP13.28□□□□□ -0.28
LMX1B-201ENST00000355497 THYN1Q9P016 225 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 FZR1Q9UM11 496 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 ZNF83P51522 516 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 ZNF117Q03924 483 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 GAMTQ14353 236 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 MMP25Q9NPA2 562 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 ZMIZ1Q9ULJ6 1067 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 LILRA5A6NI73 299 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 PRSS1P07477 247 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 INHBBP09529 407 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 GALP22466 123 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 FGF8P55075 233 aaPredicted RBP13.28□□□□□ -0.28
LMX1B-201ENST00000355497 ERVS71-1P61550 626 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 HLA-DRB3P79483 266 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 SMAD4Q13485 552 aaKnown RBP13.28□□□□□ -0.28
LMX1B-201ENST00000355497 ZNF141Q15928 474 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 ZNF766Q5HY98 468 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 DGAT2L7PQ6IED9 249 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 DOLPP1Q86YN1 238 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 ARRDC1-AS1Q9H2J1 176 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 MANBALQ9NQG1 85 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 IL36GQ9NZH8 169 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 ELOA3CA0A087WX78 387 aaPredicted RBP13.28□□□□□ -0.28
LMX1B-201ENST00000355497 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.28□□□□□ -0.28
LMX1B-201ENST00000355497 SRFP11831 508 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 CAMPP49913 170 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 HFEQ30201 348 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 NHLRC1Q6VVB1 395 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 DYRK2Q92630 601 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 NAT8Q9UHE5 227 aa13.28□□□□□ -0.28
LMX1B-201ENST00000355497 RPL34P49207 117 aaKnown RBP13.27□□□□□ -0.28
LMX1B-201ENST00000355497 SULT1A1P50225 295 aa13.27□□□□□ -0.28
LMX1B-201ENST00000355497 ELOBQ15370 118 aa13.27□□□□□ -0.28
LMX1B-201ENST00000355497 INPP5JQ15735 1006 aaPredicted RBP13.27□□□□□ -0.28
LMX1B-201ENST00000355497 TMEM65Q6PI78 240 aa13.27□□□□□ -0.28
LMX1B-201ENST00000355497 SCGB1D4Q6XE38 83 aa13.27□□□□□ -0.28
LMX1B-201ENST00000355497 BTLAQ7Z6A9 289 aa13.27□□□□□ -0.28
LMX1B-201ENST00000355497 MTFP1Q9UDX5 166 aa13.27□□□□□ -0.28
LMX1B-201ENST00000355497 WASHC3Q9Y3C0 194 aa13.27□□□□□ -0.28
LMX1B-201ENST00000355497 MTCH2Q9Y6C9 303 aa13.27□□□□□ -0.28
LMX1B-201ENST00000355497 CTAG2O75638 210 aa13.27□□□□□ -0.28
LMX1B-201ENST00000355497 CRISP2P16562 243 aa13.27□□□□□ -0.28
LMX1B-201ENST00000355497 ACAA2P42765 397 aaKnown RBP13.27□□□□□ -0.28
LMX1B-201ENST00000355497 PRSS54Q6PEW0 395 aa13.27□□□□□ -0.28
LMX1B-201ENST00000355497 OR1B1Q8NGR6 318 aa13.27□□□□□ -0.28
LMX1B-201ENST00000355497 PHYHIPLQ96FC7 376 aa13.27□□□□□ -0.28
LMX1B-201ENST00000355497 ATP5SQ99766 215 aa13.27□□□□□ -0.28
LMX1B-201ENST00000355497 EXOGQ9Y2C4 368 aaKnown RBP13.27□□□□□ -0.28
LMX1B-201ENST00000355497 PPIHO43447 177 aaKnown RBP13.27□□□□□ -0.29
LMX1B-201ENST00000355497 SEMA7AO75326 666 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 IGLV3-25P01717 112 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 OR3A4PP47883 348 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 LBHQ53QV2 105 aaPredicted RBP13.27□□□□□ -0.29
LMX1B-201ENST00000355497 SLC35E4Q6ICL7 350 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 LRP11Q86VZ4 500 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 SFTPA2Q8IWL1 248 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 SFTPA1Q8IWL2 248 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 OR2C3Q8N628 320 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 OR1L3Q8NH93 324 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 PECRQ9BY49 303 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 TMEM191AQ9H0A3 160 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 IL20Q9NYY1 176 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 PLPP2O43688 288 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 LANCL1O43813 399 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 C6orf201Q7Z4U5 140 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 PDPNQ86YL7 162 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 OR13G1Q8NGZ3 307 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 CITO14578 2027 aa13.27□□□□□ -0.29
LMX1B-201ENST00000355497 MPC2O95563 127 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 FGF9P31371 208 aaPredicted RBP13.26□□□□□ -0.29
LMX1B-201ENST00000355497 TCTN1Q2MV58 587 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 ATG101Q9BSB4 218 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 SIGLEC7Q9Y286 467 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 IGHV3-43A0A0B4J1X8 118 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 OPN1MWP04001 364 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 OPN1MW2P0DN77 364 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 OPN1MW3P0DN78 364 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 IGHV3-43DP0DP04 118 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 GLULP15104 373 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 ORM2P19652 201 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 SCAND1P57086 179 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 RPL30P62888 115 aaKnown RBP13.26□□□□□ -0.29
LMX1B-201ENST00000355497 LIAT1Q6ZQX7 453 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 NUFIP2Q7Z417 695 aaKnown RBP13.26□□□□□ -0.29
LMX1B-201ENST00000355497 LRRC29Q8WV35 223 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 ANAPC16Q96DE5 110 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 WDFY2Q96P53 400 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 C19orf43Q9BQ61 176 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 LPAR3Q9UBY5 353 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 OR5AC1P0C628 307 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 SCGB1A1P11684 91 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 FMODQ06828 376 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 C5orf17Q8NAS9 161 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 MAP1LC3CQ9BXW4 147 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 TMEM167BQ9NRX6 74 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 CDK2AP1O14519 115 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 RPS4Y1P22090 263 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms