RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 MLC1Q15049 377 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 TMEM176BQ3YBM2 270 aaPredicted RBP4.75□□□□□ -1.65
CD47-201ENST00000355354 OR2B11Q5JQS5 317 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 ADAM5Q6NVV9 412 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 TAF8Q7Z7C8 310 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 JAGN1Q8N5M9 183 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 PNPLA2Q96AD5 504 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 OR2M4Q96R27 311 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 ST6GALNAC5Q9BVH7 336 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 LDAHQ9H6V9 325 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 FBXO7Q9Y3I1 522 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 A0A0G2JPF8 293 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 HNRNPCL2B2RXH8 293 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 HNRNPCL3B7ZW38 293 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 H2AFB1P0C5Y9 115 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 FAM87AP0C7U9 286 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 HNRNPCL4P0DMR1 293 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 ACSM1Q08AH1 577 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 ALKBH1Q13686 389 aaKnown RBP4.75□□□□□ -1.65
CD47-201ENST00000355354 HSD17B12Q53GQ0 312 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 CLLU1Q5K131 121 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 RPUSD3Q6P087 351 aaKnown RBP4.75□□□□□ -1.65
CD47-201ENST00000355354 WDR92Q96MX6 357 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 OR8B4Q96RC9 309 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 KLHL42Q9P2K6 505 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 ARPC3O15145 178 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 SSNA1O43805 119 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 CDC14BO60729 498 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 AMY2AP04746 511 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 HPNP05981 417 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 GTF2F2P13984 249 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 PTGS2P35354 604 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 UQCRFS1P47985 274 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 BIDP55957 195 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 SLC17A1Q14916 467 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 CDKL4Q5MAI5 379 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 YRDCQ86U90 279 aaKnown RBP4.75□□□□□ -1.65
CD47-201ENST00000355354 ZNF619Q8N2I2 560 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 HSD17B11Q8NBQ5 300 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 VPS37AQ8NEZ2 397 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 LRRC20Q8TCA0 184 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 CCDC107Q8WV48 283 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 CEP19Q96LK0 163 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 TNFSF18Q9UNG2 199 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 MED31Q9Y3C7 131 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 LOC100289279A0A1B0GTE1 492 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 FAM25EA8MYX2 175 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 STMND1H3BQB6 276 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 RRHO14718 337 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 GNRHRP30968 328 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 ZNF121P58317 390 aaPredicted RBP4.75□□□□□ -1.65
CD47-201ENST00000355354 POLR2GP62487 172 aaKnown RBP eCLIP4.75□□□□□ -1.65
CD47-201ENST00000355354 PJVKQ0ZLH3 352 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 SPATA12Q7Z6I5 190 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 LHFPL1Q86WI0 220 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 ZNF575Q86XF7 245 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 ATG5Q9H1Y0 275 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 ORC6Q9Y5N6 252 aa4.75□□□□□ -1.65
CD47-201ENST00000355354 CHCHD2Q9Y6H1 151 aaPredicted RBP4.75□□□□□ -1.65
CD47-201ENST00000355354 IGKV1OR2-108A0A075B7D4 117 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 A0A1W2PNV4 684 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 A0A1W2PPH5 198 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 OVOL3O00110 214 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 GPX4P36969 197 aaPredicted RBP4.74□□□□□ -1.65
CD47-201ENST00000355354 SLC25A1P53007 311 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 ARFIP1P53367 373 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 RPL30P62888 115 aaKnown RBP4.74□□□□□ -1.65
CD47-201ENST00000355354 ADAM8P78325 824 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 ANXA8L1Q5VT79 327 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 ZNF774Q6NX45 483 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 GCNT2Q8N0V5 402 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 MVB12AQ96EY5 273 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 MISP3Q96FF7 219 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 GSN-AS1Q9NRJ2 163 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 ELOA3DA6NLF2 546 aaPredicted RBP4.74□□□□□ -1.65
CD47-201ENST00000355354 TXNL1O43396 289 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 TGM6O95932 706 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 B4GALT1P15291 398 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 S100A11P31949 105 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 CAPZBP47756 277 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 BLKP51451 505 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 ELOA3BQ3SY89 546 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 CDNFQ49AH0 187 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 LCN1P1Q5VSP4 162 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 TRIQKQ629K1 86 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 SRFBP1Q8NEF9 429 aaKnown RBP4.74□□□□□ -1.65
CD47-201ENST00000355354 ELOA3Q8NG57 546 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 FCAMRQ8WWV6 532 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 ZPBPQ9BS86 351 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 TIMM29Q9BSF4 260 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 GON7Q9BXV9 100 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 TMEM222Q9H0R3 208 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 PRSS37A4D1T9 235 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 TUBAL3A6NHL2 446 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 TBX19O60806 448 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 RGS9O75916 674 aaPredicted RBP4.74□□□□□ -1.65
CD47-201ENST00000355354 IFNA16P05015 189 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 LYL1P12980 280 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 RBM34P42696 430 aaKnown RBP4.74□□□□□ -1.65
CD47-201ENST00000355354 TGFBR3Q03167 851 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms