RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 RNF186Q9NXI6 227 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 DMRT1Q9Y5R6 373 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 IDSB3KWA1 339 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 ST8SIA5O15466 376 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 DHRS3O75911 302 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 Q8IYB0 196 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 GVQW1Q8N7I0 195 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 OR5D13Q8NGL4 314 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 MAP1LC3CQ9BXW4 147 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 DCAF16Q9NXF7 216 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 HCFC2Q9Y5Z7 792 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 IGHV3-20A0A0C4DH32 117 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 TMEM30CPA0ZSE6 113 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 LNP1A1A4G5 178 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 PAFAH1B2P68402 229 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 NKAIN1Q4KMZ8 207 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 FAM219BQ5XKK7 198 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 OR13H1Q8NG92 308 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 FGF14Q92915 247 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 WDR34Q96EX3 536 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 C12orf49Q9H741 205 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 TMEM30AQ9NV96 361 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 LGALS4P56470 323 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 EGLN1Q9GZT9 426 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 CACNG5Q9UF02 275 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 PAM16Q9Y3D7 125 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 PUSL1Q8N0Z8 303 aaKnown RBP11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 TMEM251Q8N6I4 163 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 TMEM178AQ8NBL3 297 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 RLN3Q8WXF3 142 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 GNB4Q9HAV0 340 aa11.35□□□□□ -0.59
SYNCRIP-201ENST00000355238 OR2J3O76001 311 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 FAM87AP0C7U9 286 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 DDTP30046 118 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 RPS16P62249 146 aaKnown RBP11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 GUCA2BQ16661 112 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 KHDC3LQ587J8 217 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 LRFN3Q9BTN0 628 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 CA10Q9NS85 328 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 OR51B4Q9Y5P0 310 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 HIST3H3Q16695 136 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 ZNF770Q6IQ21 691 aaPredicted RBP11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 OR4D9Q8NGE8 314 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 TBX15Q96SF7 602 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 ZNF77Q15935 545 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 ZBP1Q9H171 429 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 MRPS18AQ9NVS2 196 aaKnown RBP11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 DNAJB12Q9NXW2 375 aaKnown RBP11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 POLR2GP62487 172 aaKnown RBP eCLIP11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 GNB1P62873 340 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 LRRC3BQ96PB8 259 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 TMEM167BQ9NRX6 74 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 KIAA1456Q9P272 454 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 A0A1B0GUL6 1792 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 IGLV3-16A0A075B6K0 115 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 C11orf94C9JXX5 98 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 PLRG1O43660 514 aaKnown RBP11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 LANCL1O43813 399 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 PDCD6O75340 191 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 PGA4P0DJD7 388 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 PGA5P0DJD9 388 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 ZNF343Q6P1L6 599 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 C6orf201Q7Z4U5 140 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 OR1L6Q8NGR2 347 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 FER1L6-AS2Q96M78 137 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 HES4Q9HCC6 221 aa11.34□□□□□ -0.59
SYNCRIP-201ENST00000355238 LOXHD1Q8IVV2 1947 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 RGPD2P0DJD1 1756 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 TRBV5-3A0A0A0MS03 114 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 PDE6DO43924 150 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 LPAR6P43657 344 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 ADPRHP54922 357 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 THSD4Q6ZMP0 1018 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 OR10V1Q8NGI7 309 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 OR1F12Q8NHA8 337 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 PHOSPHO2Q8TCD6 241 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 ACY3Q96HD9 319 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 LRRC3CA6NJW4 275 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 CA3P07451 260 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 RRADP55042 308 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 SMIM21Q3B7S5 101 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 RGS7BPQ6MZT1 257 aaPredicted RBP11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 C17orf78Q8N4C9 275 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 ST6GAL1P15907 406 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 RPS4Y1P22090 263 aaKnown RBP11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 MDH2P40926 338 aaKnown RBP11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 PCP4P48539 62 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 ZNF385CQ66K41 422 aaPredicted RBP11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 C20orf196Q8IYI0 205 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 APOBEC3DQ96AK3 386 aaPredicted RBP11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 ZNF707Q96C28 371 aaPredicted RBP11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 MRM2Q9UI43 246 aaKnown RBP11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 ERRFI1Q9UJM3 462 aaPredicted RBP11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 LOC102724200A0A096LPH7 203 aaPredicted RBP11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 SLC25A5P05141 298 aaKnown RBP11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 OR3A4PP47883 348 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 FOXF1Q12946 379 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 YRDCQ86U90 279 aaKnown RBP11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 VN1R2Q8NFZ6 395 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 VN1R17PQ8TDU5 208 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms