RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 AQP3Q92482 292 aa13.26□□□□□ -0.29
CTSA-202ENST00000354880 Q96M66 194 aa13.26□□□□□ -0.29
CTSA-202ENST00000354880 RNF115Q9Y4L5 304 aa13.26□□□□□ -0.29
CTSA-202ENST00000354880 CHD6Q8TD26 2715 aa13.26□□□□□ -0.29
CTSA-202ENST00000354880 SOCS1O15524 211 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 GRPP07492 148 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 BCL3P20749 454 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 RNASE12Q5GAN4 147 aaKnown RBP13.25□□□□□ -0.29
CTSA-202ENST00000354880 CHST4Q8NCG5 386 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 C19orf18Q8NEA5 215 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 GTF3AQ92664 365 aaKnown RBP13.25□□□□□ -0.29
CTSA-202ENST00000354880 YIPF5Q969M3 257 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 AUNIPQ9H7T9 357 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 POLDIP2Q9Y2S7 368 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 COL12A1Q99715 3063 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 IGHV3-64DA0A0J9YX35 117 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 DEFB108AA8MXU0 73 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 E7EQL1 145 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 CDIPTO14735 213 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 LANCL1O43813 399 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 RHBDL1O75783 438 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 KIR2DL3P43628 341 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 RGS21Q2M5E4 152 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 ZNF260Q3ZCT1 412 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 ELP2Q6IA86 826 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 FBXL14Q8N1E6 418 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 BATF2Q8N1L9 274 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 OR52I2Q8NH67 350 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 FCAMRQ8WWV6 532 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 TRIM63Q969Q1 353 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 RAB3CQ96E17 227 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 ELMOD3Q96FG2 381 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 ZMAT3Q9HA38 289 aaKnown RBP13.25□□□□□ -0.29
CTSA-202ENST00000354880 ST3GAL6Q9Y274 331 aa13.25□□□□□ -0.29
CTSA-202ENST00000354880 MEIOCA2RUB1 952 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 WIPF3A6NGB9 483 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 PLAUP00749 431 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 CD3GP09693 182 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 GABRR1P24046 479 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 PRSS3P35030 304 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 SERPINF1P36955 418 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 CD200P41217 278 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 INPP1P49441 399 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 ZNF81P51508 661 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 TMEM50BP56557 158 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 DEFA1P59665 94 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 DEFA3P59666 94 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 PIGYQ3MUY2 71 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 CDNFQ49AH0 187 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 NEUROG1Q92886 237 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 PIK3IP1Q96FE7 263 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 RBFOX1Q9NWB1 397 aaKnown RBP13.24□□□□□ -0.29
CTSA-202ENST00000354880 ABCA4P78363 2273 aa13.24□□□□□ -0.29
CTSA-202ENST00000354880 FAM208BQ5VWN6 2430 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 PKDREJQ9NTG1 2253 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 TMEM235A6NFC5 223 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 F8VVB4 439 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 F8VWA3 439 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 AKR7A2O43488 359 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 SPRY3O43610 288 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 GNB3P16520 340 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 LOXP28300 417 aaPredicted RBP13.23□□□□□ -0.29
CTSA-202ENST00000354880 BLVRBP30043 206 aaPredicted RBP13.23□□□□□ -0.29
CTSA-202ENST00000354880 APOBEC3AP31941 199 aaPredicted RBP13.23□□□□□ -0.29
CTSA-202ENST00000354880 RBM11P57052 281 aaKnown RBP13.23□□□□□ -0.29
CTSA-202ENST00000354880 FGF12P61328 243 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 TAF9Q16594 264 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 PLAC9Q5JTB6 97 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 HACD4Q5VWC8 232 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 DNM1P46Q6ZS02 220 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 Q6ZTK2 550 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 POC5Q8NA72 575 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 SETD6Q8TBK2 473 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 POM121Q96HA1 1249 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 HS3ST6Q96QI5 342 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 TMEM204Q9BSN7 226 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 TLNRD1Q9H1K6 362 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 RHOFQ9HBH0 211 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 ZDHHC8Q9ULC8 765 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 TBC1D24Q9ULP9 559 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 DOPEY1Q5JWR5 2465 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 USP9XQ93008 2570 aaPredicted RBP13.23□□□□□ -0.29
CTSA-202ENST00000354880 LINC00854A0A1B0GVQ3 168 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 A6NLC8 198 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 FOXI3A8MTJ6 420 aaPredicted RBP13.23□□□□□ -0.29
CTSA-202ENST00000354880 GEMIN2O14893 280 aaKnown RBP13.23□□□□□ -0.29
CTSA-202ENST00000354880 HIST1H1DP16402 221 aaKnown RBP13.23□□□□□ -0.29
CTSA-202ENST00000354880 PRAMEF6Q5VXH4 476 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 ZNF57Q68EA5 555 aaPredicted RBP13.23□□□□□ -0.29
CTSA-202ENST00000354880 C11orf53Q8IXP5 236 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 Q8IYB0 196 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 ARHGAP5-AS1Q96IT6 56 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 ZNF488Q96MN9 340 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 CISD1Q9NZ45 108 aaKnown RBP13.23□□□□□ -0.29
CTSA-202ENST00000354880 KLK11Q9UBX7 282 aa13.23□□□□□ -0.29
CTSA-202ENST00000354880 ELF5Q9UKW6 265 aaPredicted RBP13.23□□□□□ -0.29
CTSA-202ENST00000354880 UBR5O95071 2799 aaPredicted RBP13.22□□□□□ -0.29
CTSA-202ENST00000354880 CHD3Q12873 2000 aaKnown RBP13.22□□□□□ -0.29
CTSA-202ENST00000354880 C19orf84I3L1E1 186 aa13.22□□□□□ -0.29
CTSA-202ENST00000354880 SULT1C2O00338 296 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms