RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 GADD45GO95257 159 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 IL1AP01583 271 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 ADH4P08319 380 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 WNT2P09544 360 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 LINC00614P0C842 121 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 MUC1P15941 1255 aaPredicted RBP9.33□□□□□ -0.92
RTN3-204ENST00000354497 TMEM11P17152 192 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 PVALBP20472 110 aaPredicted RBP9.33□□□□□ -0.92
RTN3-204ENST00000354497 MVDP53602 400 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 VAX1Q5SQQ9 334 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 C10orf91Q5T1B1 145 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 LCE2AQ5TA79 106 aaPredicted RBP9.33□□□□□ -0.92
RTN3-204ENST00000354497 C16orf54Q6UWD8 224 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 BBS10Q8TAM1 723 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 TCTEX1D2Q8WW35 142 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 SSMEM1Q8WWF3 244 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 DYRK2Q92630 601 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 MAL2Q969L2 176 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 RAB24Q969Q5 203 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 MCHR2Q969V1 340 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 R3HDM4Q96D70 268 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 SLC25A44Q96H78 314 aaPredicted RBP9.33□□□□□ -0.92
RTN3-204ENST00000354497 C14orf144Q96I85 54 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 PRDM13Q9H4Q3 707 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 PSORS1C1Q9UIG5 152 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 POMT1Q9Y6A1 747 aa9.33□□□□□ -0.92
RTN3-204ENST00000354497 LOC100509620A0A075B734 347 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 FAM240BA0A1B0GVZ2 78 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 C5orf63A6NC05 138 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 FAM74A7A6NL05 159 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 NUDT19A8MXV4 375 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 TCAPO15273 167 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 LYRM1O43325 122 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 IGHG1P01857 330 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 MMP7P09237 267 aaPredicted RBP9.32□□□□□ -0.92
RTN3-204ENST00000354497 PGA4P0DJD7 388 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 PGA3P0DJD8 388 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 ZNF32P17041 273 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 RGS8P57771 180 aaPredicted RBP9.32□□□□□ -0.92
RTN3-204ENST00000354497 LOXL3P58215 753 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 IL5RAQ01344 420 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 PAX2Q02962 417 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 OPCMLQ14982 345 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 OR1Q1Q15612 314 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 FAM74A3Q4VXF1 159 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 SAMD5Q5TGI4 173 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 RNLSQ5VYX0 342 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.32□□□□□ -0.92
RTN3-204ENST00000354497 FUNDC1Q8IVP5 155 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 PDZD9Q8IXQ8 264 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 SPAG16Q8N0X2 631 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 SVBPQ8N300 66 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 C19orf18Q8NEA5 215 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 OR8B3Q8NGG8 313 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 OR13C3Q8NGS6 347 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 NEIL1Q96FI4 390 aaPredicted RBP9.32□□□□□ -0.92
RTN3-204ENST00000354497 POM121L2Q96KW2 1035 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 SAMD8Q96LT4 415 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 OR8B2Q96RD0 313 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 CDCA4Q9BXL8 241 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 PRRG3Q9BZD7 231 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 TPT1P8Q9HAU6 139 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 ZFP57Q9NU63 452 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 NUDT15Q9NV35 164 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 SLC13A4Q9UKG4 626 aa9.32□□□□□ -0.92
RTN3-204ENST00000354497 KIR2DS1A0A191URI9 304 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 A0A1B0GV90 55 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 HSBP1L1C9JCN9 74 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 TMEM178BH3BS89 294 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 SURF4O15260 269 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 XPNPEP2O43895 674 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 TPST1O60507 370 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 HPGDSO60760 199 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 FAM20BO75063 409 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 ATG12O94817 140 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 FADS2O95864 444 aaKnown RBP9.31□□□□□ -0.92
RTN3-204ENST00000354497 CH25HO95992 272 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 CYB5R3P00387 301 aaPredicted RBP9.31□□□□□ -0.92
RTN3-204ENST00000354497 MT-ATP6P00846 226 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 IGHV4-59P01825 116 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 ALDOCP09972 364 aaKnown RBP9.31□□□□□ -0.92
RTN3-204ENST00000354497 SULT1A3P0DMM9 295 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 SULT1A4P0DMN0 295 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 FPR3P25089 353 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 SLC6A1P30531 599 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 CDAP32320 146 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 PITPNBP48739 271 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 CDH12P55289 794 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 RPL15P61313 204 aaKnown RBP9.31□□□□□ -0.92
RTN3-204ENST00000354497 ERVK-25P63136 954 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 DGCR6Q14129 220 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 KPRPQ5T749 579 aaPredicted RBP9.31□□□□□ -0.92
RTN3-204ENST00000354497 ZNF774Q6NX45 483 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 FAM122BQ7Z309 247 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 NOXO1Q8NFA2 376 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 OR2V2Q96R30 315 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 PPP1R3EQ9H7J1 279 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 EVA1AQ9H8M9 152 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 A4GALTQ9NPC4 353 aa9.31□□□□□ -0.92
RTN3-204ENST00000354497 AIG1Q9NVV5 245 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms