RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 VPS13AQ96RL7 3174 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 CRYM-AS1A6NIL9 109 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 APOC3P02656 99 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 FCGR3AP08637 254 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 MMP7P09237 267 aaPredicted RBP19.2■□□□□ 0.66
UPF3A-201ENST00000351487 ZNF883P0CG24 379 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 SGPP2Q8IWX5 399 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 BPIFCQ8NFQ6 507 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 OR51F2Q8NH61 342 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 TECTBQ96PL2 329 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 MICU1Q9BPX6 476 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 CMSS1Q9BQ75 279 aaKnown RBP19.2■□□□□ 0.66
UPF3A-201ENST00000351487 SMOC1Q9H4F8 434 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 IGKV1-12A0A0C4DH73 117 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 LINC01387J3KSC0 135 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 PLATP00750 562 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 IGKV1D-12P01611 117 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 HOXB5P09067 269 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 OR5H8P0DN80 308 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 ZNF92Q03936 586 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 AIMP2Q13155 320 aaKnown RBP19.2■□□□□ 0.66
UPF3A-201ENST00000351487 RBM39Q14498 530 aaKnown RBP19.2■□□□□ 0.66
UPF3A-201ENST00000351487 ZNF845Q96IR2 970 aaPredicted RBP19.2■□□□□ 0.66
UPF3A-201ENST00000351487 SPRY4Q9C004 299 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 ZNF581Q9P0T4 197 aa19.2■□□□□ 0.66
UPF3A-201ENST00000351487 BOKQ9UMX3 212 aaPredicted RBP19.2■□□□□ 0.66
UPF3A-201ENST00000351487 TSPAN4O14817 238 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 CD79AP11912 226 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 FUT6P51993 359 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 PRSS12P56730 875 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 DHRS11Q6UWP2 260 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 RNF141Q8WVD5 230 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 SPSB4Q96A44 273 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 TAAR9Q96RI9 348 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 SULT4A1Q9BR01 284 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 DDA1Q9BW61 102 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 SLC5A7Q9GZV3 580 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 ASF1BQ9NVP2 202 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 NECAP2Q9NVZ3 263 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 ATPIF1Q9UII2 106 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 IGKV3D-15A0A087WSY6 115 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 XRCC2O43543 280 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 PDSS1Q5T2R2 415 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 OSR2Q8N2R0 312 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 OR10AD1Q8NGE0 317 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 STRADBQ9C0K7 418 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 BCO1Q9HAY6 547 aa19.19■□□□□ 0.66
UPF3A-201ENST00000351487 RAB11FIP2Q7L804 512 aa19.18■□□□□ 0.66
UPF3A-201ENST00000351487 PRDM14Q9GZV8 571 aa19.18■□□□□ 0.66
UPF3A-201ENST00000351487 SLC6A15Q9H2J7 730 aa19.18■□□□□ 0.66
UPF3A-201ENST00000351487 LIME1Q9H400 295 aa19.18■□□□□ 0.66
UPF3A-201ENST00000351487 SLC7A11Q9UPY5 501 aa19.18■□□□□ 0.66
UPF3A-201ENST00000351487 ZNF816-ZNF321PA0A0X1KG74 233 aa19.17■□□□□ 0.66
UPF3A-201ENST00000351487 FARS2O95363 451 aaKnown RBP19.17■□□□□ 0.66
UPF3A-201ENST00000351487 EDN3P14138 238 aa19.17■□□□□ 0.66
UPF3A-201ENST00000351487 SIGLEC14Q08ET2 396 aa19.17■□□□□ 0.66
UPF3A-201ENST00000351487 PDZK1IP1Q13113 114 aa19.17■□□□□ 0.66
UPF3A-201ENST00000351487 ZNF585AQ6P3V2 769 aa19.17■□□□□ 0.66
UPF3A-201ENST00000351487 ATRAIDQ6UW56 229 aa19.17■□□□□ 0.66
UPF3A-201ENST00000351487 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.17■□□□□ 0.66
UPF3A-201ENST00000351487 TMED6Q8WW62 240 aa19.17■□□□□ 0.66
UPF3A-201ENST00000351487 C1QTNF5Q9BXJ0 243 aa19.17■□□□□ 0.66
UPF3A-201ENST00000351487 ACKR4Q9NPB9 350 aa19.17■□□□□ 0.66
UPF3A-201ENST00000351487 LRFN1Q9P244 771 aa19.17■□□□□ 0.66
UPF3A-201ENST00000351487 GEMIN2O14893 280 aaKnown RBP19.17■□□□□ 0.66
UPF3A-201ENST00000351487 RRADP55042 308 aa19.17■□□□□ 0.66
UPF3A-201ENST00000351487 PIGYQ3MUY2 71 aa19.17■□□□□ 0.66
UPF3A-201ENST00000351487 GSKIPQ9P0R6 139 aa19.17■□□□□ 0.66
UPF3A-201ENST00000351487 TUBD1Q9UJT1 453 aa19.17■□□□□ 0.66
UPF3A-201ENST00000351487 NUDT19A8MXV4 375 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 SFTPBP07988 381 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 FAM157CP0CG43 387 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 S100A10P60903 97 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 IAH1Q2TAA2 248 aaPredicted RBP19.16■□□□□ 0.66
UPF3A-201ENST00000351487 TCEAL6Q6IPX3 200 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 COLCA1Q6ZS62 124 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 FBXL14Q8N1E6 418 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 TMEM105Q8N8V8 129 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 FNDC9Q8TBE3 224 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 TCEAL3Q969E4 200 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 LRRC46Q96FV0 321 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 CNTNAP3BQ96NU0 1288 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 CNTNAP3Q9BZ76 1288 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 LINC00470Q9BZP3 86 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 ZNF703Q9H7S9 590 aaPredicted RBP19.16■□□□□ 0.66
UPF3A-201ENST00000351487 ZDBF2Q9HCK1 2354 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 TAAR5O14804 337 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 ZNF708P17019 499 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 OPRM1P35372 400 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 LPAL2Q16609 132 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 PABPC1L2AQ5JQF8 200 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 TSPO2Q5TGU0 170 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 PLCXD3Q63HM9 321 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 THOC3Q96J01 351 aaKnown RBP19.16■□□□□ 0.66
UPF3A-201ENST00000351487 FAM173AQ9BQD7 235 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 PCDHB16Q9NRJ7 776 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 FRYLO94915 3013 aa19.16■□□□□ 0.66
UPF3A-201ENST00000351487 TECTAO75443 2155 aa19.15■□□□□ 0.66
UPF3A-201ENST00000351487 KMT2EQ8IZD2 1858 aa19.15■□□□□ 0.66
UPF3A-201ENST00000351487 ZNF850A8MQ14 1090 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms