RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 IGKV1D-12P01611 117 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 PET100P0DJ07 73 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 EPHA8P29322 1005 aaPredicted RBP15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 ZNF84P51523 738 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 RSU1Q15404 277 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 UBE2ZQ9H832 354 aaPredicted RBP15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 PTRH2Q9Y3E5 179 aaKnown RBP15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 CRYM-AS1A6NIL9 109 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 MBPP02686 304 aaPredicted RBP15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 OR5AC1P0C628 307 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 CCL4P13236 92 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 LIFP15018 202 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 HIST1H3AP68431 136 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 HIST2H3PS2Q5TEC6 136 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 HIST2H3AQ71DI3 136 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 RAB11FIP2Q7L804 512 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 OR11L1Q8NGX0 322 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 FGFBP3Q8TAT2 258 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 SECTM1Q8WVN6 248 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 SAT2Q96F10 170 aaPredicted RBP15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 FOXD3Q9UJU5 478 aaPredicted RBP15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 A0A0G2JMM0 328 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 A0A1W2PPB8 328 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 A0A1W2PRS3 328 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 KIR3DP1A8MWS1 328 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 C1QL1O75973 258 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 LCATP04180 440 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 SULT1A2P50226 295 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 ASCL1P50553 236 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 RAB13P51153 203 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 YRDCQ86U90 279 aaKnown RBP15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 WFDC1Q9HC57 220 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 CRLF2Q9HC73 371 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 ZFP57Q9NU63 452 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 MEMO1Q9Y316 297 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 CCDC187A0A096LP49 1063 aa15.73■□□□□ 0.11
PTP4A3-202ENST00000349124 CST4P01036 141 aa15.73■□□□□ 0.11
PTP4A3-202ENST00000349124 CTSDP07339 412 aaPredicted RBP15.73■□□□□ 0.11
PTP4A3-202ENST00000349124 RFC3P40938 356 aa15.73■□□□□ 0.11
PTP4A3-202ENST00000349124 SURF2Q15527 256 aaPredicted RBP15.73■□□□□ 0.11
PTP4A3-202ENST00000349124 IGHV1-45A0A0A0MS14 117 aa15.73■□□□□ 0.11
PTP4A3-202ENST00000349124 CD5P06127 495 aa15.73■□□□□ 0.11
PTP4A3-202ENST00000349124 B4GALT1P15291 398 aa15.73■□□□□ 0.11
PTP4A3-202ENST00000349124 CXCL12P48061 93 aa15.73■□□□□ 0.11
PTP4A3-202ENST00000349124 SHEQ5VZ18 495 aa15.73■□□□□ 0.11
PTP4A3-202ENST00000349124 MR1Q95460 341 aa15.73■□□□□ 0.11
PTP4A3-202ENST00000349124 ALKBH3Q96Q83 286 aaPredicted RBP15.73■□□□□ 0.11
PTP4A3-202ENST00000349124 DKKL1Q9UK85 242 aa15.73■□□□□ 0.11
PTP4A3-202ENST00000349124 RFNGQ9Y644 331 aa15.73■□□□□ 0.11
PTP4A3-202ENST00000349124 TRIOBPQ9H2D6 2365 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 A0A1B0GV50 99 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 SGCEO43556 437 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 NME2P1O60361 137 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 TGIF1Q15583 401 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 Q6ZPA2 131 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 TDHQ8IZJ6 230 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 MAML2Q8IZL2 1156 aaPredicted RBP15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 TMEM156Q8N614 296 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 OR5L1Q8NGL2 311 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 SAP25Q8TEE9 199 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 SPTSSAQ969W0 71 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 IMMP1LQ96LU5 166 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 METTL9Q9H1A3 318 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 KLF2Q9Y5W3 355 aaPredicted RBP15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 ZNF98A6NK75 572 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 PPT1P50897 306 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 F2RL1P55085 397 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 STARD6P59095 220 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 FAM76BQ5HYJ3 339 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 FOXL2NBQ6ZUU3 175 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 FBXL14Q8N1E6 418 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 OR52M1Q8NGK5 317 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 RTN4IP1Q8WWV3 396 aaPredicted RBP15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 HS3ST3B1Q9Y662 390 aa15.72■□□□□ 0.11
PTP4A3-202ENST00000349124 NUDT19A8MXV4 375 aa15.71■□□□□ 0.11
PTP4A3-202ENST00000349124 FAM157AC9JC47 383 aa15.71■□□□□ 0.11
PTP4A3-202ENST00000349124 KLF7O75840 302 aaPredicted RBP15.71■□□□□ 0.11
PTP4A3-202ENST00000349124 IFNA21P01568 189 aa15.71■□□□□ 0.11
PTP4A3-202ENST00000349124 CRYGSP22914 178 aa15.71■□□□□ 0.11
PTP4A3-202ENST00000349124 FAM27BQ5VT28 67 aa15.71■□□□□ 0.11
PTP4A3-202ENST00000349124 OR10AD1Q8NGE0 317 aa15.71■□□□□ 0.11
PTP4A3-202ENST00000349124 GLYATL2Q8WU03 294 aa15.71■□□□□ 0.11
PTP4A3-202ENST00000349124 KIRREL1Q96J84 757 aa15.71■□□□□ 0.11
PTP4A3-202ENST00000349124 ANGPTL4Q9BY76 406 aa15.71■□□□□ 0.11
PTP4A3-202ENST00000349124 TUBD1Q9UJT1 453 aa15.71■□□□□ 0.11
PTP4A3-202ENST00000349124 TAAR5O14804 337 aa15.71■□□□□ 0.11
PTP4A3-202ENST00000349124 COX6A1P12074 109 aa15.71■□□□□ 0.11
PTP4A3-202ENST00000349124 DSCR4P56555 118 aaPredicted RBP15.71■□□□□ 0.11
PTP4A3-202ENST00000349124 PEA15Q15121 130 aa15.71■□□□□ 0.11
PTP4A3-202ENST00000349124 HLA-BQ31612 363 aa15.71■□□□□ 0.11
PTP4A3-202ENST00000349124 PLXDC2Q6UX71 529 aa15.71■□□□□ 0.11
PTP4A3-202ENST00000349124 COLCA2A8K830 154 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 RRP8O43159 456 aaKnown RBP15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 SYNGR3O43761 229 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 EIF1BO60739 113 aaKnown RBP15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 ONECUT2O95948 504 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 F10P00742 488 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 ZNF728P0DKX0 622 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 DAOP14920 347 aa15.7■□□□□ 0.1
PTP4A3-202ENST00000349124 ZNF32P17041 273 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms