RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 DECR2Q9NUI1 292 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 CYP8B1Q9UNU6 501 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 MRPS28Q9Y2Q9 187 aaKnown RBP9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 GOLT1BQ9Y3E0 138 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 LOC101059948A0A1B0GTJ6 334 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 A0A1B0GV50 99 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 C11orf98E9PRG8 122 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 PLPP3O14495 311 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 RRP8O43159 456 aaKnown RBP9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 CYB5R3P00387 301 aaPredicted RBP9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 TTRP02766 147 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 TK1P04183 234 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 GIMD1P0DJR0 217 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 HNRNPKP61978 463 aaKnown RBP eCLIP9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 EIF3IQ13347 325 aaKnown RBP9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 FZD2Q14332 565 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 DEFB110Q30KQ9 67 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 SLC16A14Q7RTX9 510 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 SULF2Q8IWU5 870 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 FAM160A2Q8N612 972 aaPredicted RBP9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 ZNF248Q8NDW4 579 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 OR10J5Q8NHC4 309 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 PTPMT1Q8WUK0 201 aaPredicted RBP9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 DNASE2BQ8WZ79 361 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 ADIPOR1Q96A54 375 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 RBMXL1Q96E39 390 aaKnown RBP9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 ARHGAP5-AS1Q96IT6 56 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 FAM206AQ9NX38 181 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 LIPGQ9Y5X9 500 aa9.06□□□□□ -0.96
CHRNA1-202ENST00000348749 TMED7-TICAM2A0A0A6YYA0 188 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 A0A1B0GU03 582 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 MED19A0JLT2 244 aaPredicted RBP9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 TMEM150CB9EJG8 249 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 M0QZK8 103 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 TOX3O15405 576 aaPredicted RBP9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 HCRTR2O43614 444 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 GGCTO75223 188 aaKnown RBP9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 OPN1MWP04001 364 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 IGKV3-11P04433 115 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 OPN1MW2P0DN77 364 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 OPN1MW3P0DN78 364 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 EPHA1P21709 976 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 IL12BP29460 328 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 DAP3P51398 398 aaKnown RBP9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 ERVFC1-1P60608 527 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 PPP1CAP62136 330 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 MRPS21P82921 87 aaKnown RBP9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 ACY1Q03154 408 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 FOXF1Q12946 379 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 ZNF266Q14584 549 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 C4orf17Q53FE4 359 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 GRINAQ7Z429 371 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 PRR18Q8N4B5 295 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 FAM89BQ8N5H3 189 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 LRTM2Q8N967 370 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 NAXEQ8NCW5 288 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 NOXO1Q8NFA2 376 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 SLC26A10Q8NG04 563 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 OR4X1Q8NH49 305 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 SLC25A36Q96CQ1 311 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 MMABQ96EY8 250 aaPredicted RBP9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 MRGPRX1Q96LB2 322 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 SYT3Q9BQG1 590 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 URM1Q9BTM9 101 aaKnown RBP9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 ST6GALNAC5Q9BVH7 336 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 MTIF3Q9H2K0 278 aaKnown RBP9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 MOB1AQ9H8S9 216 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 VAX2Q9UIW0 290 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 V9GYS6 101 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 ATG2AQ2TAZ0 1938 aa9.05□□□□□ -0.96
CHRNA1-202ENST00000348749 FAM230AA0A1W2PPH8 454 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 GEMIN2O14893 280 aaKnown RBP9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 TSPAN2O60636 221 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 CA11O75493 328 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 AHSA1O95433 338 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 FUT3P21217 361 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 BCKDHBP21953 392 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 PDLIM4P50479 330 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 BLKP51451 505 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 NOVA1P51513 510 aaKnown RBP9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 HSF1Q00613 529 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 TAF9Q16594 264 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 CHRFAM7AQ494W8 412 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 OR2G3Q8NGZ4 309 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 RNF133Q8WVZ7 376 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 ZNF524Q96C55 264 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 TMEM208Q9BTX3 173 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 OR8D2Q9GZM6 311 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 SRD5A3Q9H8P0 318 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 GPR84Q9NQS5 396 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 GPR27Q9NS67 375 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 LANCL2Q9NS86 450 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 AK3Q9UIJ7 227 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 COA3Q9Y2R0 106 aaPredicted RBP9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 TMEM210A6NLX4 147 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 FOXI3A8MTJ6 420 aaPredicted RBP9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 ZNF705GA8MUZ8 300 aaPredicted RBP9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 PITX3O75364 302 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 MPZL1O95297 269 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 HBE1P02100 147 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms