RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 DCTDP32321 178 aa9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 EMDP50402 254 aa9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 ATP5IP56385 69 aaPredicted RBP9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 CLN3Q13286 438 aa9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 PDLIM3Q53GG5 364 aaPredicted RBP9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 C16orf52Q8NHV5 167 aa9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 RGP1Q92546 391 aaPredicted RBP9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 CARHSP1Q9Y2V2 147 aaKnown RBP9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 PMS2P1A4D2B8 440 aa9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 NKX6-3A6NJ46 265 aa9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 DHRS7CA6NNS2 312 aa9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 EIF4E2O60573 245 aaKnown RBP9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 ADRA2CP18825 462 aa9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 RPS27P42677 84 aaKnown RBP9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 CATR1Q13166 79 aa9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 SNAI3Q3KNW1 292 aa9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 FAM3DQ96BQ1 224 aa9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 CDK5RAP2Q96SN8 1893 aa9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 AKAP11Q9UKA4 1901 aa9.95□□□□□ -0.82
SMARCE1-202ENST00000348513 HELTA6NFD8 242 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 HIST1H1CP16403 213 aaKnown RBP9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 MC5RP33032 325 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 ELLP55199 621 aaPredicted RBP9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 TMEM99Q8N816 258 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 SLC5A6Q9Y289 635 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 GPR55Q9Y2T6 319 aaPredicted RBP9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 NHSQ6T4R5 1651 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 FCN1O00602 326 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 ISLRO14498 428 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 ST8SIA3O43173 380 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 PHF1O43189 567 aaPredicted RBP9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 ZNF728P0DKX0 622 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 SDHBP21912 280 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 RPL34P49207 117 aaKnown RBP9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 NPY4RP50391 375 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 FAM78BQ5VT40 261 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 ZNF346Q9UL40 294 aaKnown RBP9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 LAMB1P07942 1786 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 TJP1Q07157 1748 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 ZIC2O95409 532 aaPredicted RBP9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 GPANK1O95872 356 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 MT-ATP6P00846 226 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 ZGLP1P0C6A0 271 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 FOLR2P14207 255 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 GABRG2P18507 467 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 HTR1DP28221 377 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 MDH2P40926 338 aaKnown RBP9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 ACVR1Q04771 509 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 ANKRD34AQ69YU3 496 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 FAM169BQ8N8A8 192 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 OR5A2Q8NGI9 324 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 OR5B3Q8NH48 314 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 OR51E1Q8TCB6 317 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 TSSK2Q96PF2 358 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 TAS2R4Q9NYW5 299 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 RCC2Q9P258 522 aaKnown RBP9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 C7orf66A4D0T2 115 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 M0R1B8 84 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 ZNF195O14628 629 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 CLDN1O95832 211 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 SLC25A37Q9NYZ2 338 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 ATP23Q9Y6H3 246 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 FAM157BP0CG42 384 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 LGALS4P56470 323 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 RUNX2Q13950 521 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 ZNF79Q15937 498 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 RPL7L1Q6DKI1 246 aaKnown RBP9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 PAQR6Q6TCH4 344 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 WFDC8Q8IUA0 241 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 PRSS35Q8N3Z0 413 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 LRRC61Q9BV99 259 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 RAB18Q9NP72 206 aa9.94□□□□□ -0.82
SMARCE1-202ENST00000348513 DEGS1O15121 323 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 ALKBH6Q3KRA9 238 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 DMRTC1Q5HYR2 192 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 BEND2Q8NDZ0 799 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 DEFB108BQ8NET1 73 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 MRGPRDQ8TDS7 321 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 ACER3Q9NUN7 267 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 MED29Q9NX70 200 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 PLEKHB1Q9UF11 243 aaPredicted RBP9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 YBX2Q9Y2T7 364 aaKnown RBP9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 C5orf49A4QMS7 147 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 PRRG2O14669 202 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 RPEL1Q2QD12 228 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 PLA1AQ53H76 456 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 DCAF10Q5QP82 559 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 ZNF660Q6AZW8 331 aaPredicted RBP9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 ADGRE4PQ86SQ3 457 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 DMRTA2Q96SC8 542 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 TEAD3Q99594 435 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 TMEM208Q9BTX3 173 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 C1QTNF3Q9BXJ4 246 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 FAM117AQ9C073 453 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 LPAR5Q9H1C0 372 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 ASIC5Q9NY37 505 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 FLVCR1Q9Y5Y0 555 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 ACKR1Q16570 336 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 Q1RN00 199 aa9.93□□□□□ -0.82
SMARCE1-202ENST00000348513 YOD1Q5VVQ6 348 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms