RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 SPRED2Q7Z698 418 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 ARHGEF39Q8N4T4 335 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 TMEM217Q8N7C4 229 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 STT3BQ8TCJ2 826 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 ELSPBP1Q96BH3 223 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 CABLES2Q9BTV7 478 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 KIAA1456Q9P272 454 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 IL17BQ9UHF5 180 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 GAB2Q9UQC2 676 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 FAM230AA0A1W2PPH8 454 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 NPIPA5E9PKD4 350 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 DVL1O14640 695 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 GUSBP08236 651 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 PAX1P15863 534 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 NOVA1P51513 510 aaKnown RBP13.47□□□□□ -0.25
LMNA-201ENST00000347559 EWSR1Q01844 656 aaKnown RBP eCLIP13.47□□□□□ -0.25
LMNA-201ENST00000347559 GNMTQ14749 295 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 GAB4Q2WGN9 574 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 FAM180AQ6UWF9 173 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 LRP11Q86VZ4 500 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 C5orf34Q96MH7 638 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 NUDT16L1Q9BRJ7 211 aaKnown RBP13.47□□□□□ -0.25
LMNA-201ENST00000347559 GPR84Q9NQS5 396 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 NPIPA1Q9UND3 350 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 CBY1Q9Y3M2 126 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 MMACHCQ9Y4U1 282 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 PIAS3Q9Y6X2 628 aa13.47□□□□□ -0.25
LMNA-201ENST00000347559 TMED7-TICAM2A0A0A6YYA0 188 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 A0A1B0GW64 132 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 C17orf105B2RV13 164 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 PLPP3O14495 311 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 IL18BPO95998 194 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 DBHP09172 617 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 OPRM1P35372 400 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 MYO7BQ6PIF6 2116 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 TMEM183AQ8IXX5 376 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 NECAP1Q8NC96 275 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 RNF133Q8WVZ7 376 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 RTN4IP1Q8WWV3 396 aaPredicted RBP13.46□□□□□ -0.25
LMNA-201ENST00000347559 SHDQ96IW2 340 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 PECRQ9BY49 303 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 PPP1R14DQ9NXH3 145 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 ZNF850A8MQ14 1090 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 CLDN34H7C241 214 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 CTSDP07339 412 aaPredicted RBP13.46□□□□□ -0.25
LMNA-201ENST00000347559 PNLIPP16233 465 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 ANOS1P23352 680 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 PPM1FP49593 454 aaPredicted RBP13.46□□□□□ -0.25
LMNA-201ENST00000347559 RRADP55042 308 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 C1orf189Q5VU69 101 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 OR4X1Q8NH49 305 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 OR14L1PQ8NHC6 308 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 C11orf40Q8WZ69 217 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 NUDT22Q9BRQ3 303 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 SMDT1Q9H4I9 107 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 GNG13Q9P2W3 67 aa13.46□□□□□ -0.25
LMNA-201ENST00000347559 DFFBO76075 338 aa13.46□□□□□ -0.26
LMNA-201ENST00000347559 FOLR1P15328 257 aa13.46□□□□□ -0.26
LMNA-201ENST00000347559 POU3F1Q03052 451 aaPredicted RBP13.46□□□□□ -0.26
LMNA-201ENST00000347559 COL13A1Q5TAT6 717 aaPredicted RBP13.46□□□□□ -0.26
LMNA-201ENST00000347559 WDR25Q64LD2 544 aaPredicted RBP13.46□□□□□ -0.26
LMNA-201ENST00000347559 SLC35G3Q8N808 338 aa13.46□□□□□ -0.26
LMNA-201ENST00000347559 SNIP1Q8TAD8 396 aaKnown RBP13.46□□□□□ -0.26
LMNA-201ENST00000347559 MAGT1Q9H0U3 335 aa13.46□□□□□ -0.26
LMNA-201ENST00000347559 FBLN5Q9UBX5 448 aa13.46□□□□□ -0.26
LMNA-201ENST00000347559 MCTS1Q9ULC4 181 aaKnown RBP13.46□□□□□ -0.26
LMNA-201ENST00000347559 ZFP92A6NM28 416 aa13.45□□□□□ -0.26
LMNA-201ENST00000347559 CST7O76096 145 aa13.45□□□□□ -0.26
LMNA-201ENST00000347559 NXPH3O95157 252 aa13.45□□□□□ -0.26
LMNA-201ENST00000347559 OR4A8P0C604 315 aa13.45□□□□□ -0.26
LMNA-201ENST00000347559 BEND2Q8NDZ0 799 aa13.45□□□□□ -0.26
LMNA-201ENST00000347559 XKRY2A2RUG3 117 aa13.45□□□□□ -0.26
LMNA-201ENST00000347559 A6NNC1 897 aa13.45□□□□□ -0.26
LMNA-201ENST00000347559 DXOO77932 396 aaKnown RBP13.45□□□□□ -0.26
LMNA-201ENST00000347559 FUT7Q11130 342 aa13.45□□□□□ -0.26
LMNA-201ENST00000347559 DNM1P34Q6PK57 102 aa13.45□□□□□ -0.26
LMNA-201ENST00000347559 SLC35E3Q7Z769 313 aa13.45□□□□□ -0.26
LMNA-201ENST00000347559 MMABQ96EY8 250 aaPredicted RBP13.45□□□□□ -0.26
LMNA-201ENST00000347559 WFIKKN1Q96NZ8 548 aa13.45□□□□□ -0.26
LMNA-201ENST00000347559 TBL1XR1Q9BZK7 514 aa13.45□□□□□ -0.26
LMNA-201ENST00000347559 MT-ATP6P00846 226 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 DUSP1P28562 367 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 CEACAM6P40199 344 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 LBX1P52954 281 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 H3F3AP84243 136 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 COL10A1Q03692 680 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 TAF9Q16594 264 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 PRTGQ2VWP7 1150 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 OOSP2Q86WS3 158 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 THNSL2Q86YJ6 484 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 LIME1Q9H400 295 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 RRAGCQ9HB90 399 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 PLEKHJ1Q9NW61 149 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 THAP10Q9P2Z0 257 aaPredicted RBP13.44□□□□□ -0.26
LMNA-201ENST00000347559 CDH23Q9H251 3354 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 RANBP2P49792 3224 aaKnown RBP13.44□□□□□ -0.26
LMNA-201ENST00000347559 MARCH11A6NNE9 402 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 IL33O95760 270 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 HSPB1P04792 205 aaKnown RBP13.44□□□□□ -0.26
LMNA-201ENST00000347559 ZNF728P0DKX0 622 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms