RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 TMEM225BP0DP42 221 aa15.9■□□□□ 0.14
KRCC1-201ENST00000347055 FCGR2AP12318 317 aa15.9■□□□□ 0.14
KRCC1-201ENST00000347055 MMP9P14780 707 aa15.9■□□□□ 0.14
KRCC1-201ENST00000347055 ITGA3P26006 1051 aa15.9■□□□□ 0.14
KRCC1-201ENST00000347055 RPS10P46783 165 aaKnown RBP15.9■□□□□ 0.14
KRCC1-201ENST00000347055 SMAD4Q13485 552 aaKnown RBP15.9■□□□□ 0.14
KRCC1-201ENST00000347055 PLPPR5Q32ZL2 321 aa15.9■□□□□ 0.14
KRCC1-201ENST00000347055 SP5Q6BEB4 398 aaPredicted RBP15.9■□□□□ 0.14
KRCC1-201ENST00000347055 ZNF574Q6ZN55 896 aaPredicted RBP15.9■□□□□ 0.14
KRCC1-201ENST00000347055 GJC3Q8NFK1 279 aa15.9■□□□□ 0.14
KRCC1-201ENST00000347055 OR14L1PQ8NHC6 308 aa15.9■□□□□ 0.14
KRCC1-201ENST00000347055 FAM213BQ8TBF2 198 aa15.9■□□□□ 0.14
KRCC1-201ENST00000347055 MAFIPQ8WZ33 124 aa15.9■□□□□ 0.14
KRCC1-201ENST00000347055 GNPNAT1Q96EK6 184 aaPredicted RBP15.9■□□□□ 0.14
KRCC1-201ENST00000347055 LYZL4Q96KX0 146 aa15.9■□□□□ 0.14
KRCC1-201ENST00000347055 SPIN2AQ99865 258 aa15.9■□□□□ 0.14
KRCC1-201ENST00000347055 SPIN2BQ9BPZ2 258 aa15.9■□□□□ 0.14
KRCC1-201ENST00000347055 TGIF2Q9GZN2 237 aa15.9■□□□□ 0.14
KRCC1-201ENST00000347055 SLC25A31Q9H0C2 315 aa15.9■□□□□ 0.14
KRCC1-201ENST00000347055 METTL9Q9H1A3 318 aa15.9■□□□□ 0.14
KRCC1-201ENST00000347055 THADAQ6YHU6 1953 aa15.89■□□□□ 0.13
KRCC1-201ENST00000347055 ATG2BQ96BY7 2078 aa15.89■□□□□ 0.13
KRCC1-201ENST00000347055 FAM230AA0A1W2PPH8 454 aa15.89■□□□□ 0.13
KRCC1-201ENST00000347055 OTX1P32242 354 aaPredicted RBP15.89■□□□□ 0.13
KRCC1-201ENST00000347055 HIST1H3AP68431 136 aa15.89■□□□□ 0.13
KRCC1-201ENST00000347055 EWSR1Q01844 656 aaKnown RBP eCLIP15.89■□□□□ 0.13
KRCC1-201ENST00000347055 UBE2V2Q15819 145 aa15.89■□□□□ 0.13
KRCC1-201ENST00000347055 NCMAPQ5T1S8 102 aa15.89■□□□□ 0.13
KRCC1-201ENST00000347055 HIST2H3PS2Q5TEC6 136 aa15.89■□□□□ 0.13
KRCC1-201ENST00000347055 BSCL2Q96G97 398 aaPredicted RBP15.89■□□□□ 0.13
KRCC1-201ENST00000347055 ZNF160Q9HCG1 818 aa15.89■□□□□ 0.13
KRCC1-201ENST00000347055 GFOD1Q9NXC2 390 aa15.89■□□□□ 0.13
KRCC1-201ENST00000347055 SEMA5BQ9P283 1151 aa15.89■□□□□ 0.13
KRCC1-201ENST00000347055 ZDHHC8Q9ULC8 765 aa15.89■□□□□ 0.13
KRCC1-201ENST00000347055 DUXBA0A1W2PPF3 345 aa15.88■□□□□ 0.13
KRCC1-201ENST00000347055 ZNF726A6NNF4 738 aa15.88■□□□□ 0.13
KRCC1-201ENST00000347055 H3BQ15 152 aa15.88■□□□□ 0.13
KRCC1-201ENST00000347055 HBE1P02100 147 aa15.88■□□□□ 0.13
KRCC1-201ENST00000347055 OR13C7P0DN81 318 aa15.88■□□□□ 0.13
KRCC1-201ENST00000347055 ARL4DP49703 201 aa15.88■□□□□ 0.13
KRCC1-201ENST00000347055 VEGFBP49765 207 aa15.88■□□□□ 0.13
KRCC1-201ENST00000347055 PYY3Q5JQD4 70 aa15.88■□□□□ 0.13
KRCC1-201ENST00000347055 ZNF506Q5JVG8 444 aa15.88■□□□□ 0.13
KRCC1-201ENST00000347055 C10orf128Q5T292 105 aa15.88■□□□□ 0.13
KRCC1-201ENST00000347055 TMEM182Q6ZP80 229 aaPredicted RBP15.88■□□□□ 0.13
KRCC1-201ENST00000347055 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.88■□□□□ 0.13
KRCC1-201ENST00000347055 C6orf201Q7Z4U5 140 aa15.88■□□□□ 0.13
KRCC1-201ENST00000347055 MOB3AQ96BX8 217 aa15.88■□□□□ 0.13
KRCC1-201ENST00000347055 PARP12Q9H0J9 701 aaKnown RBP15.88■□□□□ 0.13
KRCC1-201ENST00000347055 RCL1Q9Y2P8 373 aaKnown RBP15.88■□□□□ 0.13
KRCC1-201ENST00000347055 PUS1Q9Y606 427 aaKnown RBP eCLIP15.88■□□□□ 0.13
KRCC1-201ENST00000347055 ZNF732B4DXR9 585 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 SRP19P09132 144 aaKnown RBP15.87■□□□□ 0.13
KRCC1-201ENST00000347055 QDPRP09417 244 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 CEACAM1P13688 526 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 HIST1H1BP16401 226 aaKnown RBP15.87■□□□□ 0.13
KRCC1-201ENST00000347055 MSR1P21757 451 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 PPP1CCP36873 323 aaKnown RBP15.87■□□□□ 0.13
KRCC1-201ENST00000347055 GUCA1AP43080 201 aaPredicted RBP15.87■□□□□ 0.13
KRCC1-201ENST00000347055 FHITP49789 147 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 FBXW4P57775 412 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 BAXQ07812 192 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 COL19A1Q14993 1142 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 OGFOD3Q6PK18 319 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 ASCL4Q6XD76 172 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 D2HGDHQ8N465 521 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 OR2C3Q8N628 320 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 OR1L3Q8NH93 324 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 TVP23CQ96ET8 276 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 NUDT22Q9BRQ3 303 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 SH3BGRL3Q9H299 93 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 NELFAQ9H3P2 528 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 SLC2A9Q9NRM0 540 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 UFSP2Q9NUQ7 469 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 TMEM242Q9NWH2 141 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 DOK5Q9P104 306 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 VDAC3Q9Y277 283 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 B3GALT1Q9Y5Z6 326 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 PIAS3Q9Y6X2 628 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 AQP7P3A6NL99 342 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 ZNF850A8MQ14 1090 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 ZNF587BE7ETH6 402 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 H3BML4 177 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 HSD17B6O14756 317 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 CDAP32320 146 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 UBE2KP61086 200 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 ELOBQ15370 118 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 SPSB3Q6PJ21 355 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 LYZL2Q7Z4W2 148 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 PPP1R3BQ86XI6 285 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 KMT5CQ86Y97 462 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 FBXL14Q8N1E6 418 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 HSD17B11Q8NBQ5 300 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 POC1BQ8TC44 478 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 RAB39BQ96DA2 213 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 PLEKHF2Q9H8W4 249 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 PCNX3Q9H6A9 2034 aa15.87■□□□□ 0.13
KRCC1-201ENST00000347055 ALPK2Q86TB3 2170 aa15.86■□□□□ 0.13
KRCC1-201ENST00000347055 PIGBOS1A0A0B4J2F0 54 aa15.86■□□□□ 0.13
KRCC1-201ENST00000347055 IFITM10A6NMD0 228 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms