RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 UBALD1Q8TB05 177 aa20.56■□□□□ 0.88
NPAS3-201ENST00000346562 RHOFQ9HBH0 211 aa20.56■□□□□ 0.88
NPAS3-201ENST00000346562 RASL12Q9NYN1 266 aa20.56■□□□□ 0.88
NPAS3-201ENST00000346562 PLCH1Q4KWH8 1693 aa20.56■□□□□ 0.88
NPAS3-201ENST00000346562 PLPP3O14495 311 aa20.55■□□□□ 0.88
NPAS3-201ENST00000346562 MOGAT2Q3SYC2 334 aa20.55■□□□□ 0.88
NPAS3-201ENST00000346562 SPNS3Q6ZMD2 512 aa20.55■□□□□ 0.88
NPAS3-201ENST00000346562 GTF2H5Q6ZYL4 71 aa20.55■□□□□ 0.88
NPAS3-201ENST00000346562 RFESDQ8TAC1 157 aa20.55■□□□□ 0.88
NPAS3-201ENST00000346562 ZNF230Q9UIE0 474 aaPredicted RBP20.55■□□□□ 0.88
NPAS3-201ENST00000346562 C3orf80F5H4A9 247 aa20.55■□□□□ 0.88
NPAS3-201ENST00000346562 SLC16A12Q6ZSM3 486 aa20.55■□□□□ 0.88
NPAS3-201ENST00000346562 PIK3IP1Q96FE7 263 aa20.55■□□□□ 0.88
NPAS3-201ENST00000346562 PYCARD-AS1I3L0S3 204 aa20.55■□□□□ 0.88
NPAS3-201ENST00000346562 CTSVO60911 334 aa20.55■□□□□ 0.88
NPAS3-201ENST00000346562 CST4P01036 141 aa20.55■□□□□ 0.88
NPAS3-201ENST00000346562 GYPAP02724 150 aa20.55■□□□□ 0.88
NPAS3-201ENST00000346562 USF1P22415 310 aaPredicted RBP20.55■□□□□ 0.88
NPAS3-201ENST00000346562 LOXHD1Q8IVV2 1947 aa20.55■□□□□ 0.88
NPAS3-201ENST00000346562 SLC25A30Q5SVS4 291 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 TMEM92Q6UXU6 159 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 MRGPRDQ8TDS7 321 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 FAAP24Q9BTP7 215 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 DCAF16Q9NXF7 216 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 TJP1Q07157 1748 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 ADAM11O75078 769 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 PDCD6O75340 191 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 ACTL6AO96019 429 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 HTRA4P83105 476 aaPredicted RBP20.54■□□□□ 0.88
NPAS3-201ENST00000346562 RPEL1Q2QD12 228 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 RNASEKQ6P5S7 137 aaKnown RBP20.54■□□□□ 0.88
NPAS3-201ENST00000346562 C20orf196Q8IYI0 205 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 PRR7Q8TB68 274 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 WBP1LQ9NX94 342 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 SFTA3P0C7M3 94 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 OR4S2Q8NH73 311 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 GABRG3Q99928 467 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 IGHA1P01876 353 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 IGHA2P01877 340 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 PMCHP20382 165 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 SFTPCP11686 197 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 CLPPQ16740 277 aaPredicted RBP20.54■□□□□ 0.88
NPAS3-201ENST00000346562 GLCCI1Q86VQ1 547 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 PLSCR3Q9NRY6 295 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 OR1A1Q9P1Q5 309 aa20.54■□□□□ 0.88
NPAS3-201ENST00000346562 SCAND1P57086 179 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 RTP5Q14D33 572 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 ATP6V1FQ16864 119 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 SP6Q3SY56 376 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 PWWP2BQ6NUJ5 590 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 MYO10Q9HD67 2058 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 OR2T8A6NH00 312 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 EXOGQ9Y2C4 368 aaKnown RBP20.53■□□□□ 0.88
NPAS3-201ENST00000346562 IGLV3-16A0A075B6K0 115 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 COL9A1P20849 921 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 CD200P41217 278 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 ZNF141Q15928 474 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 UQCC3Q6UW78 93 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 LILRB1Q8NHL6 650 aaPredicted RBP20.53■□□□□ 0.88
NPAS3-201ENST00000346562 NAA60Q9H7X0 242 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 MICAL3Q7RTP6 2002 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 C21orf140B9A014 251 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 SBK3P0C264 359 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 SKP2Q13309 424 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 RHBDD2Q6NTF9 364 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 C1RLQ9NZP8 487 aa20.53■□□□□ 0.88
NPAS3-201ENST00000346562 AREGP15514 252 aa20.52■□□□□ 0.88
NPAS3-201ENST00000346562 GALP22466 123 aa20.52■□□□□ 0.88
NPAS3-201ENST00000346562 G0S2P27469 103 aa20.52■□□□□ 0.88
NPAS3-201ENST00000346562 NKG7Q16617 165 aa20.52■□□□□ 0.88
NPAS3-201ENST00000346562 SPCS3P61009 180 aa20.52■□□□□ 0.88
NPAS3-201ENST00000346562 SPINK14Q6IE38 97 aa20.52■□□□□ 0.88
NPAS3-201ENST00000346562 ETV3LQ6ZN32 361 aa20.52■□□□□ 0.88
NPAS3-201ENST00000346562 SF3B5Q9BWJ5 86 aaKnown RBP20.52■□□□□ 0.88
NPAS3-201ENST00000346562 CCL2P13500 99 aa20.52■□□□□ 0.88
NPAS3-201ENST00000346562 HOXA4Q00056 320 aaPredicted RBP20.52■□□□□ 0.88
NPAS3-201ENST00000346562 CHAC2Q8WUX2 184 aa20.52■□□□□ 0.88
NPAS3-201ENST00000346562 AVPR2P30518 371 aa20.52■□□□□ 0.87
NPAS3-201ENST00000346562 NUBPLQ8TB37 319 aa20.52■□□□□ 0.87
NPAS3-201ENST00000346562 SH2D2AQ9NP31 389 aa20.52■□□□□ 0.87
NPAS3-201ENST00000346562 GATCO43716 136 aaKnown RBP20.51■□□□□ 0.87
NPAS3-201ENST00000346562 GALR1P47211 349 aa20.51■□□□□ 0.87
NPAS3-201ENST00000346562 ASB10Q8WXI3 467 aa20.51■□□□□ 0.87
NPAS3-201ENST00000346562 PAPPA2Q9BXP8 1791 aa20.51■□□□□ 0.87
NPAS3-201ENST00000346562 HTR1DP28221 377 aa20.51■□□□□ 0.87
NPAS3-201ENST00000346562 OR3A1P47881 315 aa20.51■□□□□ 0.87
NPAS3-201ENST00000346562 FAM27D1Q5T7N8 215 aa20.51■□□□□ 0.87
NPAS3-201ENST00000346562 WDR74Q6RFH5 385 aaPredicted RBP20.51■□□□□ 0.87
NPAS3-201ENST00000346562 OR6X1Q8NH79 312 aa20.51■□□□□ 0.87
NPAS3-201ENST00000346562 CACNG5Q9UF02 275 aa20.51■□□□□ 0.87
NPAS3-201ENST00000346562 RBPMS2Q6ZRY4 209 aaKnown RBP20.51■□□□□ 0.87
NPAS3-201ENST00000346562 C6orf201Q7Z4U5 140 aa20.51■□□□□ 0.87
NPAS3-201ENST00000346562 OR1B1Q8NGR6 318 aa20.51■□□□□ 0.87
NPAS3-201ENST00000346562 PTP4A1Q93096 173 aa20.51■□□□□ 0.87
NPAS3-201ENST00000346562 ZNF275Q9NSD4 429 aaPredicted RBP20.51■□□□□ 0.87
NPAS3-201ENST00000346562 C20orf141Q9NUB4 165 aa20.51■□□□□ 0.87
NPAS3-201ENST00000346562 OOEPA6NGQ2 149 aa20.51■□□□□ 0.87
NPAS3-201ENST00000346562 NDUFB6O95139 128 aa20.51■□□□□ 0.87
NPAS3-201ENST00000346562 TUSC1Q2TAM9 212 aa20.51■□□□□ 0.87
NPAS3-201ENST00000346562 MIDNQ504T8 468 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms