RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 NPY4RP50391 375 aa12.15□□□□□ -0.46
CDK5RAP1-202ENST00000346416 GPM6AP51674 278 aa12.15□□□□□ -0.46
CDK5RAP1-202ENST00000346416 CEACAM21Q3KPI0 293 aa12.15□□□□□ -0.46
CDK5RAP1-202ENST00000346416 IGFL3Q6UXB1 125 aa12.15□□□□□ -0.46
CDK5RAP1-202ENST00000346416 RFPL4BQ6ZWI9 263 aa12.15□□□□□ -0.46
CDK5RAP1-202ENST00000346416 LYG2Q86SG7 212 aa12.15□□□□□ -0.46
CDK5RAP1-202ENST00000346416 ZDHHC23Q8IYP9 409 aa12.15□□□□□ -0.46
CDK5RAP1-202ENST00000346416 C9orf106Q8NAJ2 232 aa12.15□□□□□ -0.46
CDK5RAP1-202ENST00000346416 ZSCAN4Q8NAM6 433 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP1-202ENST00000346416 OR10AD1Q8NGE0 317 aa12.15□□□□□ -0.46
CDK5RAP1-202ENST00000346416 OR5AP2Q8NGF4 316 aa12.15□□□□□ -0.46
CDK5RAP1-202ENST00000346416 OPA3Q9H6K4 179 aa12.15□□□□□ -0.46
CDK5RAP1-202ENST00000346416 PCDHB16Q9NRJ7 776 aa12.15□□□□□ -0.46
CDK5RAP1-202ENST00000346416 AK3Q9UIJ7 227 aa12.15□□□□□ -0.46
CDK5RAP1-202ENST00000346416 NOP16Q9Y3C1 178 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP1-202ENST00000346416 IGKV1D-8A0A087WSZ0 117 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 A0A1W2PR80 420 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 TPOP07202 933 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 CD34P28906 385 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 KIR2DL2P43627 348 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 HAAOP46952 286 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 NPBWR2P48146 333 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 IL13RA1P78552 427 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 CHRFAM7AQ494W8 412 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 LY6G6FQ5SQ64 297 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FAHD2BQ6P2I3 314 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 Q6ZT83 130 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 TMEM17Q86X19 198 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FAHD2AQ96GK7 314 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 SULT4A1Q9BR01 284 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 EHFQ9NZC4 300 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 DCHS1Q96JQ0 3298 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 GTF3C1Q12789 2109 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 PLSCR5A0PG75 271 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 C9orf170A2RU37 121 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 CEACAM18A8MTB9 384 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 MSTNO14793 375 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 IL2RAP01589 272 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ZNF14P17017 642 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 VAMP1P23763 118 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 PER3P56645 1201 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 RBM11P57052 281 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 UBE2NP61088 152 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 BRICD5Q6PL45 260 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OVCH2Q7RTZ1 564 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 MYPOPQ86VE0 399 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 BATF2Q8N1L9 274 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OR8H1Q8NGG4 311 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OR5L1Q8NGL2 311 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OR13G1Q8NGZ3 307 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 WNT2BQ93097 391 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 COL25A1Q9BXS0 654 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 PPA2Q9H2U2 334 aa12.14□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ANKRD11Q6UB99 2663 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ZNF732B4DXR9 585 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 SNAPC5O75971 98 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 CELA3BP08861 270 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 DHODHQ02127 395 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 PDCD1Q15116 288 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 TBC1D28Q2M2D7 210 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ACSF3Q4G176 576 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 AADACL3Q5VUY0 350 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 VWA1Q6PCB0 445 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 LHFPL1Q86WI0 220 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 MITD1Q8WV92 249 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 CMSS1Q9BQ75 279 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 TMPRSS13Q9BYE2 586 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 C5orf66Q9H5L9 145 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 HEXA-AS1Q9H8Q6 139 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 GPR132Q9UNW8 380 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 AHRRA9YTQ3 701 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 LILRA1O75019 489 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 RGS11O94810 467 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 CNOT4O95628 575 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 NFYAP23511 347 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 IL32P24001 234 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 TSC22D1Q15714 1073 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 GABRA6Q16445 453 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 SPATA46Q5T0L3 261 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 LIN54Q6MZP7 749 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 TEX261Q6UWH6 196 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 CCDC36Q8IYA8 594 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OR5A2Q8NGI9 324 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OR5M8Q8NGP6 311 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 CASTOR1Q8WTX7 329 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ASB13Q8WXK3 278 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 DYRK2Q92630 601 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 U3KQ87 197 aa12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 MAP1BP46821 2468 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP1-202ENST00000346416 INTS1Q8N201 2190 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ANKRD30BLA7E2S9 258 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 PDCD6O75340 191 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 PDGFAP04085 211 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 C4BPBP20851 252 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 IDH3GP51553 393 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 TAS2R31P59538 309 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ARPC4P59998 168 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FOXF2Q12947 444 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 BAMBIQ13145 260 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 DAZAP2Q15038 168 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms