RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 CARFQ8N187 725 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 FAM181AQ8N9Y4 354 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 CD300LFQ8TDQ1 290 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 GPX8Q8TED1 209 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 SOSTQ9BQB4 213 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 SLC25A21Q9BQT8 299 aaPredicted RBP11.61□□□□□ -0.55
CASC4-202ENST00000345795 SETD2Q9BYW2 2564 aaPredicted RBP11.61□□□□□ -0.55
CASC4-202ENST00000345795 ONECUT2O95948 504 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 PDGFAP04085 211 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 HPNP05981 417 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 ZNF695Q8IW36 515 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 TSNAXQ99598 290 aaKnown RBP11.61□□□□□ -0.55
CASC4-202ENST00000345795 ANGPTL4Q9BY76 406 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 GPR35Q9HC97 309 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 TIMM8AO60220 97 aaPredicted RBP11.61□□□□□ -0.55
CASC4-202ENST00000345795 CRYZL1O95825 349 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 RAB6AP20340 208 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 GSK3AP49840 483 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 PCBD1P61457 104 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 RAB32Q13637 225 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 SPINK9Q5DT21 86 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 TEX30Q5JUR7 227 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 SLC25A47Q6Q0C1 308 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 RFPL4BQ6ZWI9 263 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 OR5T1Q8NG75 326 aa11.61□□□□□ -0.55
CASC4-202ENST00000345795 CPNE4Q96A23 557 aaPredicted RBP11.61□□□□□ -0.55
CASC4-202ENST00000345795 ZNF552Q9H707 407 aaPredicted RBP11.61□□□□□ -0.55
CASC4-202ENST00000345795 IGLV3-12A0A075B6K2 115 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 IGHV3-43A0A0B4J1X8 118 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 M0R036 132 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 ALX3O95076 343 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 BPNT1O95861 308 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 IGHV3-43DP0DP04 118 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 EDDM3BP56851 147 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 OR52H1Q8NGJ2 320 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 EIF5A2Q9GZV4 153 aaKnown RBP11.6□□□□□ -0.55
CASC4-202ENST00000345795 WDR54Q9H977 334 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 TINAGQ9UJW2 476 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 TGM6O95932 706 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 TRAPPC2P0DI81 140 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 TRAPPC2BP0DI82 140 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 PTPN13Q12923 2485 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 ENDOGQ14249 297 aaKnown RBP11.6□□□□□ -0.55
CASC4-202ENST00000345795 ZNF826PQ6ZT77 177 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 SSX9Q7RTT3 188 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 FDCSPQ8NFU4 85 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 M1APQ8TC57 530 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 ADAT1Q9BUB4 502 aaKnown RBP11.6□□□□□ -0.55
CASC4-202ENST00000345795 TMEM38BQ9NVV0 291 aa11.6□□□□□ -0.55
CASC4-202ENST00000345795 A0A1B0GTI1 187 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 DHRS7CA6NNS2 312 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 CDIPTO14735 213 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 CST7O76096 145 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 F12P00748 615 aaPredicted RBP11.59□□□□□ -0.55
CASC4-202ENST00000345795 PRDX4Q13162 271 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 IGSF11Q5DX21 431 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 AK3Q9UIJ7 227 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 CENPEQ02224 2701 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 C9orf170A2RU37 121 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 MCRIP1C9JLW8 97 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 WISP2O76076 250 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 CHRM2P08172 466 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 GIPP09681 153 aaPredicted RBP11.59□□□□□ -0.55
CASC4-202ENST00000345795 PAN3Q58A45 887 aaKnown RBP11.59□□□□□ -0.55
CASC4-202ENST00000345795 HACD4Q5VWC8 232 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 OSR2Q8N2R0 312 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 OR1J1Q8NGS3 322 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 RTN4IP1Q8WWV3 396 aaPredicted RBP11.59□□□□□ -0.55
CASC4-202ENST00000345795 RBMXL1Q96E39 390 aaKnown RBP11.59□□□□□ -0.55
CASC4-202ENST00000345795 DNTTIP1Q9H147 329 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 C7orf66A4D0T2 115 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 OR2F2O95006 317 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 PTAFRP25105 342 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 ZNF83P51522 516 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 TRA2AQ13595 282 aaKnown RBP eCLIP11.59□□□□□ -0.55
CASC4-202ENST00000345795 CALHM1Q8IU99 346 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 PAQR4Q8N4S7 273 aaPredicted RBP11.59□□□□□ -0.55
CASC4-202ENST00000345795 MRPL13Q9BYD1 178 aaKnown RBP11.59□□□□□ -0.55
CASC4-202ENST00000345795 OR2H1Q9GZK4 316 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 SDHAF2Q9NX18 166 aa11.59□□□□□ -0.55
CASC4-202ENST00000345795 IGKV1D-8A0A087WSZ0 117 aa11.58□□□□□ -0.55
CASC4-202ENST00000345795 TMEM265A0A087WTH1 108 aa11.58□□□□□ -0.55
CASC4-202ENST00000345795 CELA3BP08861 270 aa11.58□□□□□ -0.55
CASC4-202ENST00000345795 FTH1P19P0C7X4 201 aa11.58□□□□□ -0.55
CASC4-202ENST00000345795 BCL3P20749 454 aa11.58□□□□□ -0.55
CASC4-202ENST00000345795 TMEM50BP56557 158 aa11.58□□□□□ -0.55
CASC4-202ENST00000345795 ZNF385CQ66K41 422 aaPredicted RBP11.58□□□□□ -0.55
CASC4-202ENST00000345795 CLEC18BQ6UXF7 455 aa11.58□□□□□ -0.55
CASC4-202ENST00000345795 LYG2Q86SG7 212 aa11.58□□□□□ -0.55
CASC4-202ENST00000345795 SULT4A1Q9BR01 284 aa11.58□□□□□ -0.55
CASC4-202ENST00000345795 TLN2Q9Y4G6 2542 aa11.58□□□□□ -0.56
CASC4-202ENST00000345795 ANKHD1Q8IWZ3 2542 aaKnown RBP11.58□□□□□ -0.56
CASC4-202ENST00000345795 SYNGR1O43759 233 aa11.58□□□□□ -0.56
CASC4-202ENST00000345795 MED6O75586 246 aa11.58□□□□□ -0.56
CASC4-202ENST00000345795 TK1P04183 234 aa11.58□□□□□ -0.56
CASC4-202ENST00000345795 OR8U9P0C7N5 309 aa11.58□□□□□ -0.56
CASC4-202ENST00000345795 ZNF239Q16600 458 aaKnown RBP11.58□□□□□ -0.56
CASC4-202ENST00000345795 ZFP62Q8NB50 900 aaPredicted RBP11.58□□□□□ -0.56
CASC4-202ENST00000345795 LYZL4Q96KX0 146 aa11.58□□□□□ -0.56
CASC4-202ENST00000345795 PECRQ9BY49 303 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms