RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 HDHD3Q9BSH5 251 aaPredicted RBP13.7□□□□□ -0.22
PTPRU-201ENST00000345512 CDH20Q9HBT6 801 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 LOC101059948A0A1B0GTJ6 334 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 VWCEQ96DN2 955 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 KCNK17Q96T54 332 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 UTP23Q9BRU9 249 aaKnown RBP13.7□□□□□ -0.22
PTPRU-201ENST00000345512 MS4A18H0YCH9 400 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 TUSC2O75896 110 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 MS4A18Q3C1V0 323 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 LY6G6FQ5SQ64 297 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 OR8G2PQ6IF36 304 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 IL22RA1Q8N6P7 574 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 OR13G1Q8NGZ3 307 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 OR10C1Q96KK4 312 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 SLC26A1Q9H2B4 701 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 A0A096LPE4 126 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 A0A1W2PPZ6 126 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 GPR37O15354 613 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 CYB5BO43169 146 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 GLULP15104 373 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 FUT3P21217 361 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 IL2RGP31785 369 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 CEACAM16Q2WEN9 425 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 ZNF774Q6NX45 483 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 DRAM2Q6UX65 266 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 OR1F12Q8NHA8 337 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 OR10J5Q8NHC4 309 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 HINT2Q9BX68 163 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 STRADBQ9C0K7 418 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 POMT1Q9Y6A1 747 aa13.7□□□□□ -0.22
PTPRU-201ENST00000345512 ANAPC1Q9H1A4 1944 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 RNF222A6NCQ9 220 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 HLA-HP01893 362 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 HAAOP46952 286 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 LPAL2Q16609 132 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 RBMS3Q6XE24 437 aaKnown RBP13.69□□□□□ -0.22
PTPRU-201ENST00000345512 C5orf66Q9H5L9 145 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 TMED3Q9Y3Q3 217 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 PLXND1Q9Y4D7 1925 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 MPTX1A8MV57 137 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 SRFP11831 508 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 ANKRD55Q3KP44 614 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 OR2A2Q6IF42 318 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 C1orf87Q8N0U7 546 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 TOLLIPQ9H0E2 274 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 PLEKHF2Q9H8W4 249 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 ENY2Q9NPA8 101 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 BOKQ9UMX3 212 aaPredicted RBP13.69□□□□□ -0.22
PTPRU-201ENST00000345512 GAB2Q9UQC2 676 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 MFNGO00587 321 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 RHBDD2Q6NTF9 364 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 OR2C3Q8N628 320 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 SLC2A8Q9NY64 477 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 MTCH2Q9Y6C9 303 aa13.69□□□□□ -0.22
PTPRU-201ENST00000345512 DNASE2O00115 360 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-201ENST00000345512 MNX1P50219 401 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-201ENST00000345512 LYZL2Q7Z4W2 148 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 NANOS1Q8WY41 292 aaKnown RBP13.68□□□□□ -0.22
PTPRU-201ENST00000345512 FBXO17Q96EF6 278 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 FUT6P51993 359 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-201ENST00000345512 WDR13Q9H1Z4 485 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 FAM206AQ9NX38 181 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 ASXL3Q9C0F0 2248 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 ICAM2P13598 275 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 ZP4Q12836 540 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 D2HGDHQ8N465 521 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 OR5C1Q8NGR4 320 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 EXTL1Q92935 676 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 SLC25A28Q96A46 364 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 INTS12Q96CB8 462 aaKnown RBP13.68□□□□□ -0.22
PTPRU-201ENST00000345512 TGIF2Q9GZN2 237 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 PARP11Q9NR21 331 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 GAR1Q9NY12 217 aaKnown RBP13.68□□□□□ -0.22
PTPRU-201ENST00000345512 TANC1Q9C0D5 1861 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 WDR1O75083 606 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 PNLIPP16233 465 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 P2RY4P51582 365 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 FOXK1P85037 733 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 UNC119Q13432 240 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 MSMO1Q15800 293 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 WSB1Q9Y6I7 421 aa13.68□□□□□ -0.22
PTPRU-201ENST00000345512 ZNF816-ZNF321PA0A0X1KG74 233 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 ZNF587BE7ETH6 402 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 CTXN2P0C2S0 81 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 NXPH1P58417 271 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 POLR2GP62487 172 aaKnown RBP eCLIP13.67□□□□□ -0.22
PTPRU-201ENST00000345512 SPANXN5Q5MJ07 72 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 SSX9Q7RTT3 188 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 OR8U1Q8NH10 309 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 CCDC74BQ96LY2 380 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 USB1Q9BQ65 265 aaKnown RBP13.67□□□□□ -0.22
PTPRU-201ENST00000345512 REG4Q9BYZ8 158 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 MYOZ1Q9NP98 299 aaPredicted RBP13.67□□□□□ -0.22
PTPRU-201ENST00000345512 IGHV3-64DA0A0J9YX35 117 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 IAPPP10997 89 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 EDN3P14138 238 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 ZNF32P17041 273 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 EIF2S3P41091 472 aaKnown RBP13.67□□□□□ -0.22
PTPRU-201ENST00000345512 PABPC1L2AQ5JQF8 200 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms