RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 OR5D13Q8NGL4 314 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 OR14K1Q8NGZ2 314 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 CENPNQ96H22 339 aaPredicted RBP10.16□□□□□ -0.78
SGCA-202ENST00000344627 FBLN5Q9UBX5 448 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 OAZ3Q9UMX2 235 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 SF3B6Q9Y3B4 125 aaKnown RBP10.16□□□□□ -0.78
SGCA-202ENST00000344627 V9GYS6 101 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 TRBV23-1A0A0A0MS06 115 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 A0A1B0GTI1 187 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 A0A1W2PPH5 198 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 ANKRD61A6NGH8 418 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 SYT7O43581 403 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 OR2T7P0C7T2 308 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 PGA5P0DJD9 388 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 RPL31P62899 125 aaKnown RBP10.15□□□□□ -0.78
SGCA-202ENST00000344627 LIAT1Q6ZQX7 453 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 KRT74Q7RTS7 529 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 FAM220AQ7Z4H9 259 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 ZNF561Q8N587 486 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 CD177Q8N6Q3 437 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 OR2T27Q8NH04 317 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 RFKQ969G6 155 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 SDSLQ96GA7 329 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 RANBP3Q9H6Z4 567 aaPredicted RBP10.15□□□□□ -0.78
SGCA-202ENST00000344627 C19orf12Q9NSK7 152 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 IMPAD1Q9NX62 359 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 GNG8Q9UK08 70 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 ZNF222Q9UK12 451 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 ORC6Q9Y5N6 252 aa10.15□□□□□ -0.78
SGCA-202ENST00000344627 hCG_1809904A0A1W2PP81 198 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 A0A1W2PPE2 198 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 A0A1W2PR64 198 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 A0A1W2PRV1 198 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 PQLC2LA1A4F0 135 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 SERPINA3P01011 423 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 PIPP12273 146 aaPredicted RBP10.14□□□□□ -0.79
SGCA-202ENST00000344627 LGALS4P56470 323 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 CDC42P60953 191 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 TMEM42Q69YG0 159 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 Q6ZSV7 163 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 REC114Q7Z4M0 266 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 CATSPERDQ86XM0 798 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 MKXQ8IYA7 352 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 OR8J1Q8NGP2 316 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 PYDC1Q8WXC3 89 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 TNFRSF14Q92956 283 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 EME1Q96AY2 570 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 PPA2Q9H2U2 334 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 WNK1Q9H4A3 2382 aa10.14□□□□□ -0.79
SGCA-202ENST00000344627 DHRS7CA6NNS2 312 aa10.13□□□□□ -0.79
SGCA-202ENST00000344627 GATBO75879 557 aaKnown RBP10.13□□□□□ -0.79
SGCA-202ENST00000344627 CSF1P09603 554 aa10.13□□□□□ -0.79
SGCA-202ENST00000344627 COX7A1P24310 79 aa10.13□□□□□ -0.79
SGCA-202ENST00000344627 LY6EQ16553 131 aa10.13□□□□□ -0.79
SGCA-202ENST00000344627 TP53I3Q53FA7 332 aa10.13□□□□□ -0.79
SGCA-202ENST00000344627 TMEM200BQ69YZ2 307 aa10.13□□□□□ -0.79
SGCA-202ENST00000344627 Q6ZTK2 550 aa10.13□□□□□ -0.79
SGCA-202ENST00000344627 ASCC1Q8N9N2 400 aaKnown RBP10.13□□□□□ -0.79
SGCA-202ENST00000344627 BEND2Q8NDZ0 799 aa10.13□□□□□ -0.79
SGCA-202ENST00000344627 RORBQ92753 470 aa10.13□□□□□ -0.79
SGCA-202ENST00000344627 SLAMF9Q96A28 289 aa10.13□□□□□ -0.79
SGCA-202ENST00000344627 SSX3Q99909 188 aa10.13□□□□□ -0.79
SGCA-202ENST00000344627 OSBPL10Q9BXB5 764 aa10.13□□□□□ -0.79
SGCA-202ENST00000344627 GABARAPL3Q9BY60 117 aa10.13□□□□□ -0.79
SGCA-202ENST00000344627 HEXA-AS1Q9H8Q6 139 aa10.13□□□□□ -0.79
SGCA-202ENST00000344627 ZNF281Q9Y2X9 895 aa10.13□□□□□ -0.79
SGCA-202ENST00000344627 MEX3AA1L020 520 aaKnown RBP10.12□□□□□ -0.79
SGCA-202ENST00000344627 H3BUX3 64 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 NOS1APO75052 506 aaPredicted RBP10.12□□□□□ -0.79
SGCA-202ENST00000344627 SULT1C4O75897 302 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 TK1P04183 234 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 OCM2P0CE71 109 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 OCMP0CE72 109 aaPredicted RBP10.12□□□□□ -0.79
SGCA-202ENST00000344627 CCL3L1P16619 93 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 PAX6P26367 422 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 KIR2DS4P43632 304 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 FUT6P51993 359 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 EDDM3BP56851 147 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 COL10A1Q03692 680 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 HERPUD1Q15011 391 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 UBE2V2Q15819 145 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 ZSCAN26Q16670 478 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 ZIK1Q3SY52 487 aaPredicted RBP10.12□□□□□ -0.79
SGCA-202ENST00000344627 CALHM1Q8IU99 346 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 RDH10Q8IZV5 341 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 C17orf50Q8WW18 174 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 BORCS8Q96FH0 119 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 CEP19Q96LK0 163 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 NRIP2Q9BQI9 281 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 CDCA4Q9BXL8 241 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 PKIBQ9C010 78 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 MEGF9Q9H1U4 602 aa10.12□□□□□ -0.79
SGCA-202ENST00000344627 LOC107986453A0A1B0GWG9 222 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 DAPL1A0PJW8 107 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 ENTPD6O75354 484 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 CYB5AP00167 134 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 CHRM2P08172 466 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 UBCP0CG48 685 aaKnown RBP10.11□□□□□ -0.79
SGCA-202ENST00000344627 CCL1P22362 96 aa10.11□□□□□ -0.79
SGCA-202ENST00000344627 GABRA5P31644 462 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms