RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 TAGLNQ01995 201 aaKnown RBP18.57■□□□□ 0.56
CCDC38-201ENST00000344280 ARL6IP1Q15041 203 aa18.57■□□□□ 0.56
CCDC38-201ENST00000344280 CNN3Q15417 329 aaKnown RBP18.57■□□□□ 0.56
CCDC38-201ENST00000344280 THOC3Q96J01 351 aaKnown RBP18.57■□□□□ 0.56
CCDC38-201ENST00000344280 C2orf50Q96LR7 162 aa18.57■□□□□ 0.56
CCDC38-201ENST00000344280 ASF1BQ9NVP2 202 aa18.57■□□□□ 0.56
CCDC38-201ENST00000344280 LRFN1Q9P244 771 aa18.57■□□□□ 0.56
CCDC38-201ENST00000344280 C14orf166Q9Y224 244 aaKnown RBP18.57■□□□□ 0.56
CCDC38-201ENST00000344280 SHANK1Q9Y566 2161 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 CYTIPO60759 359 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 LYL1P12980 280 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 EDN3P14138 238 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 SRYQ05066 204 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 PPA1Q15181 289 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 SURF2Q15527 256 aaPredicted RBP18.56■□□□□ 0.56
CCDC38-201ENST00000344280 TSPO2Q5TGU0 170 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 FOXRED2Q8IWF2 684 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 BAP18Q8IXM2 172 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 CPEB3Q8NE35 698 aaKnown RBP18.56■□□□□ 0.56
CCDC38-201ENST00000344280 OR10AD1Q8NGE0 317 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 TMED6Q8WW62 240 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 MARS2Q96GW9 593 aaKnown RBP18.56■□□□□ 0.56
CCDC38-201ENST00000344280 A0A1B0GW55 424 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 TERTO14746 1132 aaKnown RBP18.56■□□□□ 0.56
CCDC38-201ENST00000344280 RRP8O43159 456 aaKnown RBP18.56■□□□□ 0.56
CCDC38-201ENST00000344280 DUX4L2P0CJ85 424 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 DUX4L3P0CJ86 424 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 DUX4L4P0CJ87 422 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 DUX4L5P0CJ88 424 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 DUX4L6P0CJ89 424 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 DUX4L7P0CJ90 424 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 OR5H8P0DN80 308 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 PRKACBP22694 351 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 CHATP28329 748 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 S100A10P60903 97 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 C9orf135Q5VTT2 229 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 SIGLEC12Q96PQ1 595 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 FOXJ2Q9P0K8 574 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 DUX4Q9UBX2 424 aa18.56■□□□□ 0.56
CCDC38-201ENST00000344280 FAM186AA6NE01 2351 aa18.55■□□□□ 0.56
CCDC38-201ENST00000344280 A0A1W2PNU3 283 aaPredicted RBP18.55■□□□□ 0.56
CCDC38-201ENST00000344280 C9orf172C9J069 976 aa18.55■□□□□ 0.56
CCDC38-201ENST00000344280 IFNA2P01563 188 aa18.55■□□□□ 0.56
CCDC38-201ENST00000344280 MMP7P09237 267 aaPredicted RBP18.55■□□□□ 0.56
CCDC38-201ENST00000344280 TPT1P13693 172 aaKnown RBP18.55■□□□□ 0.56
CCDC38-201ENST00000344280 AKR1C2P52895 323 aa18.55■□□□□ 0.56
CCDC38-201ENST00000344280 AKR1C1Q04828 323 aa18.55■□□□□ 0.56
CCDC38-201ENST00000344280 RBM39Q14498 530 aaKnown RBP18.55■□□□□ 0.56
CCDC38-201ENST00000344280 RIPPLY2Q5TAB7 128 aa18.55■□□□□ 0.56
CCDC38-201ENST00000344280 NSUN5P2Q63ZY6 315 aa18.55■□□□□ 0.56
CCDC38-201ENST00000344280 RTL6Q6ICC9 239 aa18.55■□□□□ 0.56
CCDC38-201ENST00000344280 FBXL14Q8N1E6 418 aa18.55■□□□□ 0.56
CCDC38-201ENST00000344280 SLC30A7Q8NEW0 376 aa18.55■□□□□ 0.56
CCDC38-201ENST00000344280 CMSS1Q9BQ75 279 aaKnown RBP18.55■□□□□ 0.56
CCDC38-201ENST00000344280 ZNF407Q9C0G0 2248 aa18.55■□□□□ 0.56
CCDC38-201ENST00000344280 FCGR3AP08637 254 aa18.54■□□□□ 0.56
CCDC38-201ENST00000344280 ZNF528Q3MIS6 628 aa18.54■□□□□ 0.56
CCDC38-201ENST00000344280 PABPC1L2AQ5JQF8 200 aa18.54■□□□□ 0.56
CCDC38-201ENST00000344280 ASCL4Q6XD76 172 aa18.54■□□□□ 0.56
CCDC38-201ENST00000344280 LHFPL2Q6ZUX7 228 aa18.54■□□□□ 0.56
CCDC38-201ENST00000344280 PIGCQ92535 297 aa18.54■□□□□ 0.56
CCDC38-201ENST00000344280 CPNE4Q96A23 557 aaPredicted RBP18.54■□□□□ 0.56
CCDC38-201ENST00000344280 LDAHQ9H6V9 325 aa18.54■□□□□ 0.56
CCDC38-201ENST00000344280 DNAJC13O75165 2243 aa18.54■□□□□ 0.56
CCDC38-201ENST00000344280 FGF16O43320 207 aa18.54■□□□□ 0.56
CCDC38-201ENST00000344280 NEURL1O76050 574 aa18.54■□□□□ 0.56
CCDC38-201ENST00000344280 DEFB123Q8N688 67 aa18.54■□□□□ 0.56
CCDC38-201ENST00000344280 NARS2Q96I59 477 aaKnown RBP18.54■□□□□ 0.56
CCDC38-201ENST00000344280 SPRY4Q9C004 299 aa18.54■□□□□ 0.56
CCDC38-201ENST00000344280 ARRDC1-AS1Q9H2J1 176 aa18.54■□□□□ 0.56
CCDC38-201ENST00000344280 HSF4Q9ULV5 492 aa18.54■□□□□ 0.56
CCDC38-201ENST00000344280 FRYQ5TBA9 3013 aa18.54■□□□□ 0.56
CCDC38-201ENST00000344280 ATF4P18848 351 aaPredicted RBP18.53■□□□□ 0.56
CCDC38-201ENST00000344280 ZNF273Q14593 569 aa18.53■□□□□ 0.56
CCDC38-201ENST00000344280 ZNF585AQ6P3V2 769 aa18.53■□□□□ 0.56
CCDC38-201ENST00000344280 Q6ZPA2 131 aa18.53■□□□□ 0.56
CCDC38-201ENST00000344280 CALHM1Q8IU99 346 aa18.53■□□□□ 0.56
CCDC38-201ENST00000344280 TOMM40LQ969M1 308 aa18.53■□□□□ 0.56
CCDC38-201ENST00000344280 AQP10Q96PS8 301 aa18.53■□□□□ 0.56
CCDC38-201ENST00000344280 DECR2Q9NUI1 292 aa18.53■□□□□ 0.56
CCDC38-201ENST00000344280 ZNF850A8MQ14 1090 aa18.53■□□□□ 0.56
CCDC38-201ENST00000344280 FOXG1P55316 489 aaPredicted RBP18.53■□□□□ 0.56
CCDC38-201ENST00000344280 SPEM2Q0P670 501 aa18.53■□□□□ 0.56
CCDC38-201ENST00000344280 PDZK1IP1Q13113 114 aa18.53■□□□□ 0.56
CCDC38-201ENST00000344280 AIMP2Q13155 320 aaKnown RBP18.53■□□□□ 0.56
CCDC38-201ENST00000344280 PLCXD3Q63HM9 321 aa18.53■□□□□ 0.56
CCDC38-201ENST00000344280 DBX2Q6ZNG2 339 aa18.53■□□□□ 0.56
CCDC38-201ENST00000344280 MARC2Q969Z3 335 aa18.53■□□□□ 0.56
CCDC38-201ENST00000344280 OR2S2Q9NQN1 319 aa18.53■□□□□ 0.56
CCDC38-201ENST00000344280 ST3GAL6Q9Y274 331 aa18.53■□□□□ 0.56
CCDC38-201ENST00000344280 MRPS18CQ9Y3D5 142 aaKnown RBP18.53■□□□□ 0.56
CCDC38-201ENST00000344280 A0A096LPE4 126 aa18.52■□□□□ 0.56
CCDC38-201ENST00000344280 A0A1W2PPZ6 126 aa18.52■□□□□ 0.56
CCDC38-201ENST00000344280 CRYM-AS1A6NIL9 109 aa18.52■□□□□ 0.56
CCDC38-201ENST00000344280 CTSDP07339 412 aaPredicted RBP18.52■□□□□ 0.56
CCDC38-201ENST00000344280 JMJD7P0C870 316 aa18.52■□□□□ 0.56
CCDC38-201ENST00000344280 CCL2P13500 99 aa18.52■□□□□ 0.56
CCDC38-201ENST00000344280 RBMXP38159 391 aaKnown RBP18.52■□□□□ 0.56
CCDC38-201ENST00000344280 DEFA5Q01523 94 aa18.52■□□□□ 0.56
CCDC38-201ENST00000344280 DAZAP2Q15038 168 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms