RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 PAPPA-AS1Q5QFB9 102 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 VAX1Q5SQQ9 334 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF761Q86XN6 746 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF479Q96JC4 524 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 CHST6Q9GZX3 395 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 C12orf49Q9H741 205 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ZCWPW2A0A1B0GU75 182 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 RND2P52198 227 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM198Q66K66 360 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 OR4F5Q8NH21 305 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 FER1L6-AS2Q96M78 137 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 SPATA33Q96N06 139 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 OR4F4Q96R69 305 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ULBP2Q9BZM5 246 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 SLC23A2Q9UGH3 650 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 TNFSF18Q9UNG2 199 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 TRBV23OR9-2A0A075B6M9 112 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 TRGC2P03986 189 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ADORA2BP29275 332 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ASIPP42127 132 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 CCSMST1Q4G0I0 132 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 LRRC15Q8TF66 581 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 THEM6Q8WUY1 208 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 C20orf173Q96LM9 149 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 RHNO1Q9BSD3 238 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM59Q9BXS4 323 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF391Q9UJN7 358 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 OR6C76A6NM76 312 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 SLC6A11P48066 632 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 CTSCP53634 463 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 PTPRCAPQ14761 206 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 SPATA45Q537H7 98 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 KLRK1P26718 216 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 MVDP53602 400 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 THSD4Q6ZMP0 1018 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 OVCA2Q8WZ82 227 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 CLCF1Q9UBD9 225 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 MRPS18CQ9Y3D5 142 aaKnown RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 H3BQ15 152 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 CCKBRP32239 447 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 RBX1P62877 108 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 HOXC5Q00444 222 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM167BQ9NRX6 74 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 DIP2CQ9Y2E4 1556 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 DNAJC25-GNG10A0A024R161 153 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 DPM2O94777 84 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 S100A4P26447 101 aaKnown RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 SLAQ13239 276 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 FAM89BQ8N5H3 189 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 MEGF9Q9H1U4 602 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 ICAM1P05362 532 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 ACHEP22303 614 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 CALHM1Q8IU99 346 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 RNF175Q8N4F7 328 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 APOBEC3GQ9HC16 384 aaKnown RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 SPATA31D1Q6ZQQ2 1576 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 CHD1O14646 1710 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 CEBPZOSA8MTT3 80 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 PTHP01270 115 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 FKBP2P26885 142 aaKnown RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 PSMB10P40306 273 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 TDGF1P3P51864 188 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 RPEL1Q2QD12 228 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 DOLPP1Q86YN1 238 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 OSMRQ99650 979 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 MRPL27Q9P0M9 148 aaKnown RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 MYH1P12882 1939 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 NPEPPSL1A6NEC2 478 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 P2RY10O00398 339 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 IL2RGP31785 369 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 NOVP48745 357 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 SIRPAP78324 504 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF684Q5T5D7 378 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF687Q8N1G0 1237 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 CPEB3Q8NE35 698 aaKnown RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 ARRDC2Q8TBH0 407 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 PRELID3AQ96N28 172 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 RARRES2Q99969 163 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 SMOC2Q9H3U7 446 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 FBXL17Q9UF56 701 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 RPL27P61353 136 aaKnown RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 RBPJQ06330 500 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 RIGQ13278 110 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 MISP3Q96FF7 219 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 MS4A4EQ96PG1 132 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 KIF26BQ2KJY2 2108 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 A0A0G2JMM0 328 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 A0A1W2PPB8 328 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 KIR3DP1A8MWS1 328 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF865P0CJ78 1059 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 RPL12P30050 165 aaKnown RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 TIMM23BQ5SRD1 257 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 SLC27A1Q6PCB7 646 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 PRSS3P2Q8NHM4 247 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 CALHM2Q9HA72 323 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 TMEFF2Q9UIK5 374 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-202ENST00000344113 MMP17Q9ULZ9 603 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 CYB561D2O14569 222 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 OR1F1O43749 312 aa3.38□□□□□ -1.87
SYNE2-202ENST00000344113 MEOX1P50221 254 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms