RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 WIF1Q9Y5W5 379 aa6.36□□□□□ -1.39
ZNF540-202ENST00000343599 KIR2DL5BA0A0G2JN68 375 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 KIR2DL5BA0A0G2JPC4 375 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 J3KTA2 159 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 CHRM4P08173 479 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 IGFBP1P08833 259 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-202ENST00000343599 UCHL1P09936 223 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 ACTBP60709 375 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 ACTA2P62736 377 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 ACTG1P63261 375 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 ACTG2P63267 376 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 ACTC1P68032 377 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 ACTA1P68133 377 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 PLGLB1Q02325 96 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 TSPAN31Q12999 210 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 FAHD2BQ6P2I3 314 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-202ENST00000343599 BTNL8Q6UX41 500 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 FAM214BQ7L5A3 538 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 KIR2DL5AQ8N109 375 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 OR5D16Q8NGK9 328 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 OR52I2Q8NH67 350 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 GEMIN6Q8WXD5 167 aaKnown RBP6.35□□□□□ -1.39
ZNF540-202ENST00000343599 ST8SIA1Q92185 356 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 FAHD2AQ96GK7 314 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 GPR21Q99679 349 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 DNAJC4Q9NNZ3 241 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 SERINC1Q9NRX5 453 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 NPEPPSL1A6NEC2 478 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 IGHA1P01876 353 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 ARG1P05089 322 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 IRF2P14316 349 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 TNFRSF1BP20333 461 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 MTNR1AP48039 350 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 CAMLGP49069 296 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 RPS23P62266 143 aaKnown RBP6.35□□□□□ -1.39
ZNF540-202ENST00000343599 HERPUD1Q15011 391 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 KCTD9Q7L273 389 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 SSX7Q7RTT5 188 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 MDGA2Q7Z553 956 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 C9orf40Q8IXQ3 194 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 ACBD7Q8N6N7 88 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 CCDC107Q8WV48 283 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 FCAMRQ8WWV6 532 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 SLC25A38Q96DW6 304 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 ATG5Q9H1Y0 275 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 ANKRD10Q9NXR5 420 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 ZNF337Q9Y3M9 751 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 ENPP4Q9Y6X5 453 aa6.35□□□□□ -1.39
ZNF540-202ENST00000343599 A1L4Q6 167 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 XRCC3O43542 346 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 TBX6O95947 436 aaPredicted RBP6.34□□□□□ -1.39
ZNF540-202ENST00000343599 CTXN2P0C2S0 81 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 OR5AC1P0C628 307 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 IGF2RP11717 2491 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 BSGP35613 385 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 OR1E2P47887 323 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 ANK2Q01484 3957 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 RUNX2Q13950 521 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 CD300LDQ6UXZ3 194 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 WDR88Q6ZMY6 472 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 LYPD6BQ8NI32 183 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 RNF128Q8TEB7 428 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 TNFAIP8L1Q8WVP5 186 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.34□□□□□ -1.39
ZNF540-202ENST00000343599 TAAR8Q969N4 342 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 MUCL1Q96DR8 90 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 NUDT11Q96G61 164 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 HRH4Q9H3N8 390 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 RGCCQ9H4X1 137 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 EXO5Q9H790 373 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 CYTL1Q9NRR1 136 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 TVP23BQ9NYZ1 205 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 ZNF230Q9UIE0 474 aaPredicted RBP6.34□□□□□ -1.39
ZNF540-202ENST00000343599 EXOGQ9Y2C4 368 aaKnown RBP6.34□□□□□ -1.39
ZNF540-202ENST00000343599 TRIOO75962 3097 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 TEX13DA0A0J9YY54 714 aaPredicted RBP6.34□□□□□ -1.39
ZNF540-202ENST00000343599 ZNF208O43345 1280 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 SYT7O43581 403 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 MTX2O75431 263 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 DFFBO76075 338 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 OR2C1O95371 312 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 PMS2P2O95744 297 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 SLC6A9P48067 706 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 KRTAP10-9P60411 292 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 CDK5Q00535 292 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 DUSP8Q13202 625 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 ATP6V1FQ16864 119 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 PRICKLE4Q2TBC4 344 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 C1orf194Q5T5A4 169 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 SLC48A1Q6P1K1 146 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 PAQR3Q6TCH7 311 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 ZNF322Q6U7Q0 402 aaPredicted RBP6.34□□□□□ -1.39
ZNF540-202ENST00000343599 OR4S1Q8NGB4 309 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 OR5M8Q8NGP6 311 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 OR6N1Q8NGY5 312 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 SLC7A13Q8TCU3 470 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 C10orf105Q8TEF2 133 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 RCC1LQ96I51 464 aaKnown RBP6.34□□□□□ -1.39
ZNF540-202ENST00000343599 SAMD8Q96LT4 415 aa6.34□□□□□ -1.39
ZNF540-202ENST00000343599 SYT3Q9BQG1 590 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms