RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 TNXAQ16473 311 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 TMEM215Q68D42 235 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 OR52L2PQ8NGH6 319 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 SPINK14Q6IE38 97 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 DEGS2Q6QHC5 323 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 OR2I1PQ8NGU4 316 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 APOBEC4Q8WW27 367 aaKnown RBP13.55□□□□□ -0.24
COL11A2-201ENST00000341947 GPR137Q96N19 417 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 RHOFQ9HBH0 211 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 SLX4Q8IY92 1834 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 AVPR2P30518 371 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 RANP62826 216 aaKnown RBP13.54□□□□□ -0.24
COL11A2-201ENST00000341947 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 COA4Q9NYJ1 87 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 RASL12Q9NYN1 266 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 GYPAP02724 150 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 GP1BAP07359 652 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 LYZP61626 148 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 CDC20Q12834 499 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 PRSS41Q7RTY9 318 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 ATP5SQ99766 215 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 TMPRSS13Q9BYE2 586 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 IGLV3-16A0A075B6K0 115 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 GNG4P50150 75 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 HTRA4P83105 476 aaPredicted RBP13.54□□□□□ -0.24
COL11A2-201ENST00000341947 VAMP3Q15836 100 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 NKG7Q16617 165 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 TMEM97Q5BJF2 176 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 C20orf141Q9NUB4 165 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 OR5V1Q9UGF6 321 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 MEX3AA1L020 520 aaKnown RBP13.54□□□□□ -0.24
COL11A2-201ENST00000341947 SOX15O60248 233 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 SFT2D2O95562 160 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 PMCHP20382 165 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 ADTRPQ96IZ2 230 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 MPC1Q9Y5U8 109 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 PLCH1Q4KWH8 1693 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 PDCD6O75340 191 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 RTP5Q14D33 572 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 LILRA6Q6PI73 481 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 LINC01555Q8NAE3 123 aa13.54□□□□□ -0.24
COL11A2-201ENST00000341947 A0A1B0GUL6 1792 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 TEX50A0A1B0GTY4 177 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 IL9P15248 144 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 SLC37A1P57057 533 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 C6orf201Q7Z4U5 140 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 COMMD1Q8N668 190 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 GABRG3Q99928 467 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 FAM157AC9JC47 383 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 SCO1O75880 301 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 IGHA1P01876 353 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 IGHA2P01877 340 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 SLC25A30Q5SVS4 291 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 RNASEKQ6P5S7 137 aaKnown RBP13.53□□□□□ -0.24
COL11A2-201ENST00000341947 SPNS2Q8IVW8 549 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 OR5R1Q8NH85 324 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 A0A1W2PRD5 423 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 A0A1W2PRF3 423 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 A0A1W2PRM7 423 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 SFTA3P0C7M3 94 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 ZNF561Q8N587 486 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 KCNMB2Q9Y691 235 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 CELA2BP08218 269 aaPredicted RBP13.53□□□□□ -0.24
COL11A2-201ENST00000341947 OR3A1P47881 315 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 RHBDD2Q6NTF9 364 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 ETV3LQ6ZN32 361 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 RASL11BQ9BPW5 248 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 CST4P01036 141 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 SKP2Q13309 424 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 SPINK9Q5DT21 86 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 FSCN3Q9NQT6 498 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 DCAF16Q9NXF7 216 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 OR1A1Q9P1Q5 309 aa13.53□□□□□ -0.24
COL11A2-201ENST00000341947 USF1P22415 310 aaPredicted RBP13.52□□□□□ -0.24
COL11A2-201ENST00000341947 ZNF141Q15928 474 aa13.52□□□□□ -0.24
COL11A2-201ENST00000341947 PIK3IP1Q96FE7 263 aa13.52□□□□□ -0.24
COL11A2-201ENST00000341947 DOK5Q9P104 306 aa13.52□□□□□ -0.24
COL11A2-201ENST00000341947 TGIF2LXQ8IUE1 241 aa13.52□□□□□ -0.24
COL11A2-201ENST00000341947 NAA60Q9H7X0 242 aa13.52□□□□□ -0.24
COL11A2-201ENST00000341947 CACNG5Q9UF02 275 aa13.52□□□□□ -0.24
COL11A2-201ENST00000341947 CD200P41217 278 aa13.52□□□□□ -0.25
COL11A2-201ENST00000341947 MIDNQ504T8 468 aa13.52□□□□□ -0.25
COL11A2-201ENST00000341947 GTF2H5Q6ZYL4 71 aa13.52□□□□□ -0.25
COL11A2-201ENST00000341947 OR4S2Q8NH73 311 aa13.52□□□□□ -0.25
COL11A2-201ENST00000341947 OR1L1Q8NH94 360 aa13.52□□□□□ -0.25
COL11A2-201ENST00000341947 VSTM2AQ8TAG5 236 aa13.52□□□□□ -0.25
COL11A2-201ENST00000341947 TCFL5Q9UL49 500 aa13.52□□□□□ -0.25
COL11A2-201ENST00000341947 EXOGQ9Y2C4 368 aaKnown RBP13.52□□□□□ -0.25
COL11A2-201ENST00000341947 PEX11BO96011 259 aa13.52□□□□□ -0.25
COL11A2-201ENST00000341947 ACTL6AO96019 429 aa13.52□□□□□ -0.25
COL11A2-201ENST00000341947 G0S2P27469 103 aa13.52□□□□□ -0.25
COL11A2-201ENST00000341947 RHNO1Q9BSD3 238 aa13.52□□□□□ -0.25
COL11A2-201ENST00000341947 RPL7P18124 248 aaKnown RBP13.52□□□□□ -0.25
COL11A2-201ENST00000341947 MOGAT2Q3SYC2 334 aa13.52□□□□□ -0.25
COL11A2-201ENST00000341947 LILRB1Q8NHL6 650 aaPredicted RBP13.52□□□□□ -0.25
COL11A2-201ENST00000341947 CDX2Q99626 313 aaPredicted RBP13.52□□□□□ -0.25
COL11A2-201ENST00000341947 ZNF275Q9NSD4 429 aaPredicted RBP13.52□□□□□ -0.25
COL11A2-201ENST00000341947 FXYD1O00168 92 aa13.51□□□□□ -0.25
COL11A2-201ENST00000341947 TMPRSS2O15393 492 aa13.51□□□□□ -0.25
COL11A2-201ENST00000341947 SRSF5Q13243 272 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms