RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 NRIP2Q9BQI9 281 aa12.92□□□□□ -0.34
NECTIN1-202ENST00000340882 HES4Q9HCC6 221 aa12.92□□□□□ -0.34
NECTIN1-202ENST00000340882 PALMDQ9NP74 551 aa12.92□□□□□ -0.34
NECTIN1-202ENST00000340882 IL20Q9NYY1 176 aa12.92□□□□□ -0.34
NECTIN1-202ENST00000340882 LINC00527Q9UJ94 153 aa12.92□□□□□ -0.34
NECTIN1-202ENST00000340882 HHLA2Q9UM44 414 aa12.92□□□□□ -0.34
NECTIN1-202ENST00000340882 KLHDC2Q9Y2U9 406 aa12.92□□□□□ -0.34
NECTIN1-202ENST00000340882 OR5B21A6NL26 309 aa12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 FAM183AA6NL82 134 aa12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 NOS1APO75052 506 aaPredicted RBP12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 NXPH2O95156 264 aa12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 HTR1DP28221 377 aa12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 RRM2P31350 389 aa12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 HAAOP46952 286 aa12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 OR3A4PP47883 348 aa12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 PLCXD3Q63HM9 321 aa12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 GLYATQ6IB77 296 aa12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 ASCC1Q8N9N2 400 aaKnown RBP12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 OR9Q2Q8NGE9 314 aa12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 FAM81AQ8TBF8 368 aa12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 CAPSLQ8WWF8 208 aa12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 BTBD10Q9BSF8 475 aa12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 CLEC7AQ9BXN2 247 aa12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 TMEM133Q9H2Q1 129 aa12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 SLC22A13Q9Y226 551 aa12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 SESN1Q9Y6P5 492 aa12.91□□□□□ -0.34
NECTIN1-202ENST00000340882 H3BUI4 141 aa12.9□□□□□ -0.34
NECTIN1-202ENST00000340882 MAP2K3P46734 347 aa12.9□□□□□ -0.34
NECTIN1-202ENST00000340882 NUDT2P50583 147 aa12.9□□□□□ -0.34
NECTIN1-202ENST00000340882 SMIM11AP58511 58 aa12.9□□□□□ -0.34
NECTIN1-202ENST00000340882 DEFB136Q30KP8 78 aa12.9□□□□□ -0.34
NECTIN1-202ENST00000340882 CGB2Q6NT52 195 aa12.9□□□□□ -0.34
NECTIN1-202ENST00000340882 TRPM8Q7Z2W7 1104 aa12.9□□□□□ -0.34
NECTIN1-202ENST00000340882 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.9□□□□□ -0.34
NECTIN1-202ENST00000340882 TSSK6Q9BXA6 273 aa12.9□□□□□ -0.34
NECTIN1-202ENST00000340882 VIPAS39Q9H9C1 493 aa12.9□□□□□ -0.34
NECTIN1-202ENST00000340882 TMEM82A0PJX8 343 aa12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 F8VVB4 439 aa12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 F8VWA3 439 aa12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 J3QT63 122 aa12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 CCL24O00175 119 aa12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 SELENOFO60613 162 aa12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 GSTT1P30711 240 aa12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 IFNGR2P38484 337 aa12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 PSMA6P60900 246 aaKnown RBP12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 ERVK11-1P61568 191 aa12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 IL18R1Q13478 541 aa12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 EDDM3AQ14507 147 aa12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 MEPCEQ7L2J0 689 aaKnown RBP12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 GDPD3Q7L5L3 318 aa12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 ZNF695Q8IW36 515 aa12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 THEM6Q8WUY1 208 aa12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 ZFP57Q9NU63 452 aa12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 ARMC1Q9NVT9 282 aa12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 DPM3Q9P2X0 92 aa12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 SAMD4AQ9UPU9 718 aaKnown RBP12.89□□□□□ -0.35
NECTIN1-202ENST00000340882 FAM172BPA6NC97 362 aa12.88□□□□□ -0.35
NECTIN1-202ENST00000340882 GASTP01350 101 aa12.88□□□□□ -0.35
NECTIN1-202ENST00000340882 LYNP07948 512 aa12.88□□□□□ -0.35
NECTIN1-202ENST00000340882 BRS3P32247 399 aa12.88□□□□□ -0.35
NECTIN1-202ENST00000340882 BLVRAP53004 296 aa12.88□□□□□ -0.35
NECTIN1-202ENST00000340882 C9orf66Q5T8R8 295 aa12.88□□□□□ -0.35
NECTIN1-202ENST00000340882 RPL13AP3Q6NVV1 102 aa12.88□□□□□ -0.35
NECTIN1-202ENST00000340882 RASSF6Q6ZTQ3 369 aa12.88□□□□□ -0.35
NECTIN1-202ENST00000340882 SHFQ7M4L6 423 aa12.88□□□□□ -0.35
NECTIN1-202ENST00000340882 OVCH2Q7RTZ1 564 aa12.88□□□□□ -0.35
NECTIN1-202ENST00000340882 PYURFQ96I23 114 aa12.88□□□□□ -0.35
NECTIN1-202ENST00000340882 HOPXQ9BPY8 73 aaPredicted RBP12.88□□□□□ -0.35
NECTIN1-202ENST00000340882 NIPAL2Q9H841 368 aa12.88□□□□□ -0.35
NECTIN1-202ENST00000340882 PIGLQ9Y2B2 252 aa12.88□□□□□ -0.35
NECTIN1-202ENST00000340882 PQLC2LA1A4F0 135 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 DNAJC8O75937 253 aaPredicted RBP12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 SOX14O95416 240 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 COX4I1P13073 169 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 SLC6A1P30531 599 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 GDNFP39905 211 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 MEF2CQ06413 473 aaPredicted RBP12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 SNAPC1Q16533 368 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 UTF1Q5T230 341 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 PLBD1Q6P4A8 553 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 LCNL1Q6ZST4 164 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 ANGPTL5Q86XS5 388 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 OR8H2Q8N162 312 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 ABHD12Q8N2K0 398 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 OR52N4Q8NGI2 321 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 OTOSQ8NHW6 89 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 CDRT15Q96T59 188 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 GPR173Q9NS66 373 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 ABCD2Q9UBJ2 740 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 ZNF256Q9Y2P7 627 aaPredicted RBP12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 SMAD5-AS1Q9Y6J3 95 aa12.87□□□□□ -0.35
NECTIN1-202ENST00000340882 HERC2O95714 4834 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 A0A0U1RQV5 110 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 LINC01548A6NM66 108 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 SEC14L6B5MCN3 397 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 NRASP01111 189 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 IGLV1-47P01700 117 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 IGLV3-1P01715 115 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 IGHA1P01876 353 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 MPZP25189 248 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms